RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 DBN1Q16643 649 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PCGF5Q86SE9 256 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 GDAP1Q8TB36 358 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 C11orf70Q9BRQ4 267 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 FNDC3AQ9Y2H6 1198 aaKnown RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 ADGRG1Q9Y653 693 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 FLT1P17948 1338 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 ZRANB2O95218 330 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■■□ 22
COL18A1-204ENST00000400337 LDHDQ86WU2 507 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF668Q96K58 619 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 ATP8B3O60423 1300 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 TJP3O95049 919 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 PHKA2P46019 1235 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 CENPUQ71F23 418 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 GINM1Q9NU53 330 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 TLK1Q9UKI8 766 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 ANO9A1A5B4 782 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 THOC5Q13769 683 aaKnown RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 PRR5LQ6MZQ0 368 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 DIS3Q9Y2L1 958 aaKnown RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 RHPN2Q8IUC4 686 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 PHF20Q9BVI0 1012 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 INTS2Q9H0H0 1204 aaKnown RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 PODXLO00592 558 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 TRIM49P0CI25 452 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 TRIM49CP0CI26 452 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF746Q6NUN9 644 aaPredicted RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 PTPRMP28827 1452 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 WDR91A4D1P6 747 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 SERPINB6P35237 376 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 APOBEC3FQ8IUX4 373 aaKnown RBP19.5■□□□□ 0.71
COL18A1-204ENST00000400337 SCYL3Q8IZE3 742 aa19.5■□□□□ 0.71
COL18A1-204ENST00000400337 MYLK4Q86YV6 388 aaPredicted RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 CLEC10AQ8IUN9 316 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 MICAL1Q8TDZ2 1067 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 POLR3FQ9H1D9 316 aaPredicted RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 ACAD9Q9H845 621 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 ESYT2A0FGR8 921 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 NCK2O43639 380 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 XPAP23025 273 aaPredicted RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 GLE1Q53GS7 698 aaKnown RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 ANXA13P27216 316 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 TNFAIP2Q03169 654 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 ARL13BQ3SXY8 428 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 ANKRD40Q6AI12 368 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 CEP120Q8N960 986 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 OTUD5Q96G74 571 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 TOPORSQ9NS56 1045 aaPredicted RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 CPSF2Q9P2I0 782 aaKnown RBP19.49■□□□□ 0.71
COL18A1-204ENST00000400337 PLS3P13797 630 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 MAP2K2P36507 400 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 NFRKBQ6P4R8 1299 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 HPS3Q969F9 1004 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 EXOC4Q96A65 974 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 RGL1Q9NZL6 768 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 PLAAQ9Y263 795 aa19.49■□□□□ 0.71
COL18A1-204ENST00000400337 S100BP04271 92 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 SBK1Q52WX2 424 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 RAB44Q7Z6P3 723 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 TOM1L1O75674 476 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 CA4P22748 312 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 GPC3P51654 580 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 C6orf118Q5T5N4 469 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 C2orf69Q8N8R5 385 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF543Q08ER8 600 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 KRT39Q6A163 491 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 PDLIM2Q96JY6 352 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 RPAP3Q9H6T3 665 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 SATB1Q01826 763 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF211Q13398 564 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 KCNB1Q14721 858 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 CYFIP1Q7L576 1253 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 ATP6V1E2Q96A05 226 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 RBM41Q96IZ5 413 aaKnown RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
COL18A1-204ENST00000400337 CACYBPQ9HB71 228 aaKnown RBP19.48■□□□□ 0.71
COL18A1-204ENST00000400337 ANTXR2P58335 489 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 DPF2Q92785 391 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 EPB41L4AQ9HCS5 686 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 HDAC6Q9UBN7 1215 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 ANGPTL3Q9Y5C1 460 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 SLC8A1P32418 973 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 EN1Q05925 392 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 ADCY2Q08462 1091 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 TTLL4Q14679 1199 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 EPHA7Q15375 998 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 MARCH10Q8NA82 808 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 DEPDC1BQ8WUY9 529 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 FAF2Q96CS3 445 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 SAYSD1Q9NPB0 183 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms