RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 RBL2Q08999 1139 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ZKSCAN8Q15776 578 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 COA1Q9GZY4 146 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MOCS2O96007 188 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 PTH1RQ03431 593 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 CAPRIN1Q14444 709 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 PRR23CQ6ZRP0 262 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 RNF180Q86T96 592 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 FAF2Q96CS3 445 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 GCOM2Q9BZD3 368 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 GRAPQ13588 217 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 SLMAPQ14BN4 828 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 IMPG1Q17R60 797 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 FAM133AQ8N9E0 248 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MAML1Q92585 1016 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 GJD4Q96KN9 370 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 PPP1R13BQ96KQ4 1090 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 CNOT10Q9H9A5 744 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 PDE11AQ9HCR9 933 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MLH3Q9UHC1 1453 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 MEIS1O00470 390 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 EFCAB14O75071 495 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 COPB2P35606 906 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
CACNA1C-215ENST00000399637 BTBD18B2RXH4 712 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 MCF2P10911 925 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 ACADMP11310 421 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 ALCAMQ13740 583 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 LRRC41Q15345 812 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 FAM133BQ5BKY9 247 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 HSPA4LO95757 839 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 CCT5P48643 541 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 TRIP13Q15645 432 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 CCL15Q16663 113 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 LRRC37BQ96QE4 947 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 GH2P01242 217 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 DDIT3P35638 169 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 IFT88Q13099 833 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 E4F1Q66K89 784 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 DONSONQ9NYP3 566 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SUN2Q9UH99 717 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 TBK1Q9UHD2 729 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 L3MBTL1Q9Y468 752 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 FGAP02671 866 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SERPING1P05155 500 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 CAPZA2P47755 286 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SPP2Q13103 211 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 PALMDQ9NP74 551 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 KIF17Q9P2E2 1029 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 STX18Q9P2W9 335 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 AGRPO00253 132 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 DYNLL1P63167 89 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 FLOT2Q14254 428 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SEPT2Q15019 361 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 ANGPT1Q15389 498 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 CENPUQ71F23 418 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 FGFR1OP2Q9NVK5 253 aa11.79□□□□□ -0.52
CACNA1C-215ENST00000399637 RASGRF2O14827 1237 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 PSMA2P25787 234 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 PAN2Q504Q3 1202 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 LRRC24Q50LG9 513 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 PDXDC1Q6P996 788 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 SCOCQ9UIL1 159 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 SCINQ9Y6U3 715 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 PALLDQ8WX93 1383 aa11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 TARBP1Q13395 1621 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-215ENST00000399637 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms