RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 ADAMTS10Q9H324 1103 aa20.21■□□□□ 0.83
SBF1-203ENST00000399627 GAS2O43903 313 aaKnown RBP20.2■□□□□ 0.82
SBF1-203ENST00000399627 CUTAO60888 179 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 GPC3P51654 580 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 CRYBB1P53674 252 aaPredicted RBP20.2■□□□□ 0.82
SBF1-203ENST00000399627 PLEKHG4Q58EX7 1191 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 CNKSR3Q6P9H4 555 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 RHPN2Q8IUC4 686 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 DBF4BQ8NFT6 615 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 PSPC1Q8WXF1 523 aaKnown RBP20.2■□□□□ 0.82
SBF1-203ENST00000399627 HERVK_113Q902F9 699 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 OSMRQ99650 979 aa20.2■□□□□ 0.82
SBF1-203ENST00000399627 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
SBF1-203ENST00000399627 MYH11P35749 1972 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 ACTN1P12814 892 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 CYP11B2P19099 503 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 PLCG1P19174 1290 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 ME1P48163 572 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
SBF1-203ENST00000399627 TSHZ1Q6ZSZ6 1077 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 MAEAQ7L5Y9 396 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 KSR1Q8IVT5 923 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 ZNF710Q8N1W2 664 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 KCTD17Q8N5Z5 321 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 LEO1Q8WVC0 666 aaPredicted RBP20.19■□□□□ 0.82
SBF1-203ENST00000399627 TMEM40Q8WWA1 233 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 PRPF31Q8WWY3 499 aaKnown RBP20.19■□□□□ 0.82
SBF1-203ENST00000399627 NLRP7Q8WX94 980 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 SEPT8Q92599 483 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 RNPC3Q96LT9 517 aaKnown RBP20.19■□□□□ 0.82
SBF1-203ENST00000399627 SCLT1Q96NL6 688 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 AGO3Q9H9G7 860 aaKnown RBP20.19■□□□□ 0.82
SBF1-203ENST00000399627 PCDHA7Q9UN72 937 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 COL4A3BPQ9Y5P4 624 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 SQORQ9Y6N5 450 aa20.19■□□□□ 0.82
SBF1-203ENST00000399627 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
SBF1-203ENST00000399627 CD52P31358 61 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 TXLNAP40222 546 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 MCPH1Q8NEM0 835 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 ASAP3Q8TDY4 903 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
SBF1-203ENST00000399627 POLR3FQ9H1D9 316 aaPredicted RBP20.18■□□□□ 0.82
SBF1-203ENST00000399627 GPRC5CQ9NQ84 441 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 CXXC1Q9P0U4 656 aaPredicted RBP20.18■□□□□ 0.82
SBF1-203ENST00000399627 CCDC39Q9UFE4 941 aa20.18■□□□□ 0.82
SBF1-203ENST00000399627 NOC2LQ9Y3T9 749 aaKnown RBP20.18■□□□□ 0.82
SBF1-203ENST00000399627 A0A087WZ62 844 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 ZBBXA8MT70 800 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 PLA2G4BP0C869 781 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 ARL2P36404 184 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 CDC42EP1Q00587 391 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 LAMTOR4Q0VGL1 99 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 FAM102BQ5T8I3 360 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 RASIP1Q5U651 963 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 USP38Q8NB14 1042 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 NLRP4Q96MN2 994 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 FDXACB1Q9BRP7 624 aaPredicted RBP20.17■□□□□ 0.82
SBF1-203ENST00000399627 RUSC1Q9BVN2 902 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 PADI3Q9ULW8 664 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 PTPRSQ13332 1948 aa20.17■□□□□ 0.82
SBF1-203ENST00000399627 ASAP2O43150 1006 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 RPS6KA5O75582 802 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 SRGAP2CP0DJJ0 459 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 DARSP14868 501 aaKnown RBP20.16■□□□□ 0.82
SBF1-203ENST00000399627 PAK2Q13177 524 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 RINT1Q6NUQ1 792 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 SHC4Q6S5L8 630 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 ZNF410Q86VK4 478 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 SYT2Q8N9I0 419 aaPredicted RBP20.16■□□□□ 0.82
SBF1-203ENST00000399627 RAD54LQ92698 747 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 APBB2Q92870 758 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 GCOM2Q9BZD3 368 aaPredicted RBP20.16■□□□□ 0.82
SBF1-203ENST00000399627 MTIF3Q9H2K0 278 aaKnown RBP20.16■□□□□ 0.82
SBF1-203ENST00000399627 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
SBF1-203ENST00000399627 A0A087X0B3 334 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 BAIAP3O94812 1187 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 GLRA2P23416 452 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 EIF4BP23588 611 aaKnown RBP20.15■□□□□ 0.82
SBF1-203ENST00000399627 SLC12A3P55017 1021 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 NFX1Q12986 1120 aaKnown RBP20.15■□□□□ 0.82
SBF1-203ENST00000399627 IKBKEQ14164 716 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 DHX8Q14562 1220 aaKnown RBP20.15■□□□□ 0.82
SBF1-203ENST00000399627 MCM6Q14566 821 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 MXD4Q14582 209 aaPredicted RBP20.15■□□□□ 0.82
SBF1-203ENST00000399627 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 C1orf186Q6ZWK4 172 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 FAM228AQ86W67 206 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 SCAND2PQ9GZW5 306 aaPredicted RBP20.15■□□□□ 0.82
SBF1-203ENST00000399627 ERVK-5Q9HDB9 667 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
SBF1-203ENST00000399627 ABHD14A-ACY1A0A1B0GW23 586 aa20.14■□□□□ 0.81
SBF1-203ENST00000399627 CSDE1O75534 798 aaKnown RBP20.14■□□□□ 0.81
SBF1-203ENST00000399627 CAPSQ13938 189 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms