RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CAV1Q03135 178 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 MAPRE2Q15555 327 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 EEPD1Q7L9B9 569 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 ADCK1Q86TW2 530 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 ATP6V0A4Q9HBG4 840 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 TSR3Q9UJK0 312 aaKnown RBP12.39□□□□□ -0.43
HLCS-202ENST00000399120 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 MARK3P27448 753 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 SYDE2Q5VT97 1194 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
HLCS-202ENST00000399120 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 GOLGA8MH3BSY2 632 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 BMP3P12645 472 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 SLC9A1P19634 815 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 RANBP1P43487 201 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 FAM180AQ6UWF9 173 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 KIF2CQ99661 725 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 SENP1Q9P0U3 644 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 NUP160Q12769 1436 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 UBN2Q6ZU65 1347 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 CHL1O00533 1208 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 BEND6Q5SZJ8 279 aaPredicted RBP12.39□□□□□ -0.43
HLCS-202ENST00000399120 SCN4BQ8IWT1 228 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 ABCB6Q9NP58 842 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 CHUKO15111 745 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 IMPDH2P12268 514 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 SLC16A2P36021 539 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 TSPY1Q01534 308 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 OSBPL10Q9BXB5 764 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 CLCA2Q9UQC9 943 aa12.39□□□□□ -0.43
HLCS-202ENST00000399120 CCNE1P24864 410 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 LZTS1Q9Y250 596 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ZNF804BA4D1E1 1349 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 CATSPER4Q7RTX7 472 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ADAM22Q9P0K1 906 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 MYL3P08590 195 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 CYP4F11Q9HBI6 524 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 EIF2AK4Q9P2K8 1649 aaKnown RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 CCDC78A2IDD5 438 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 CAPZA2P47755 286 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ARFIP2P53365 341 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 PRAMEP78395 509 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 TAS2R42Q7RTR8 314 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 PANX2Q96RD6 677 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SP110Q9HB58 689 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 EML4Q9HC35 981 aaKnown RBP12.38□□□□□ -0.43
HLCS-202ENST00000399120 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 PLB1Q6P1J6 1458 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SPDYE5A6NIY4 337 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 SPDYE7PQ495Y7 208 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 RINLQ6ZS11 566 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 PLD3Q8IV08 490 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 OPTNQ96CV9 577 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 PIGSQ96S52 555 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLCS-202ENST00000399120 ADNPQ9H2P0 1102 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
HLCS-202ENST00000399120 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
HLCS-202ENST00000399120 CLCN6P51797 869 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 LRRC63Q05C16 580 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
HLCS-202ENST00000399120 NBNO60934 754 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 S100A5P33763 92 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 NAALADL2Q58DX5 795 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 PPM1NQ8N819 430 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
HLCS-202ENST00000399120 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
HLCS-202ENST00000399120 AIPL1Q9NZN9 384 aa12.37□□□□□ -0.43
HLCS-202ENST00000399120 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms