RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 A0A087WZ62 844 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PP2D1A8MPX8 630 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 GPR182O15218 404 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 IBSPP21815 317 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FGFR4P22455 802 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CDC25AP30304 524 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 HTRA4P83105 476 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 EMC2Q15006 297 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ECM1Q16610 540 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 POLR3CQ9BUI4 534 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TUFT1Q9NNX1 390 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 INSL6Q9Y581 213 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LAD1O00515 517 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 DARSP14868 501 aaKnown RBP15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RPA1P27694 616 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RFC5P40937 340 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RARRES1P49788 294 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ATP2C1P98194 919 aaPredicted RBP15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PDIA5Q14554 519 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 BRAPQ7Z569 592 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ERMNQ8TAM6 284 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PRPF31Q8WWY3 499 aaKnown RBP15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 NLRP4Q96MN2 994 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 YME1L1Q96TA2 773 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ADAM2Q99965 735 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 JPH2Q9BR39 696 aaPredicted RBP15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 XPNPEP1Q9NQW7 623 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 STXBP5LQ9Y2K9 1186 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PPME1Q9Y570 386 aa15.72■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LINC01553A4QN01 128 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RFXAPO00287 272 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CCT6AP40227 531 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PRPHP41219 470 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FAM173BQ6P4H8 233 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 DTHD1Q6ZMT9 781 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CRIPAKQ8N1N5 446 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CCDC43Q96MW1 224 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 IFT122Q9HBG6 1241 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TRANK1O15050 2925 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 UNC80Q8N2C7 3258 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DENND3A2RUS2 1198 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SRGAP2CP0DJJ0 459 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 FOSL2P15408 326 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 LAMTOR4Q0VGL1 99 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ADGRE1Q14246 886 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 HAUS3Q68CZ6 603 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 EXOC8Q8IYI6 725 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ZNF710Q8N1W2 664 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SPRYD3Q8NCJ5 442 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MTRQ99707 1265 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GCOM2Q9BZD3 368 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MTMR6Q9Y217 621 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 TTC3P53804 2025 aa15.7■□□□□ 0.1
HLA-DQB1-202ENST00000399079 VWA3AA6NCI4 1184 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DGAT1O75907 488 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 XRCC6P12956 609 aaKnown RBP eCLIP15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 CDC42EP1Q00587 391 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 RESTQ13127 1097 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ODR4Q5SWX8 454 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ZNF410Q86VK4 478 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 RAB34Q9BZG1 259 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 RGS18Q9NS28 235 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 KIAA1024Q9UPX6 916 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 REV3LO60673 3130 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
HLA-DQB1-202ENST00000399079 STX6O43752 255 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GAS2O43903 313 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DGKIO75912 1065 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GATMP50440 423 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DSC3Q14574 896 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SLC24A5Q71RS6 500 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 C17orf80Q9BSJ5 609 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MMTAG2Q9BU76 263 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 MINDY3Q9H8M7 445 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 RC3H2Q9HBD1 1191 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 GPRC5CQ9NQ84 441 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DDX19AQ9NUU7 478 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 C9IYK1 514 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 IGFBP4P22692 258 aa15.68■□□□□ 0.1
HLA-DQB1-202ENST00000399079 SARSP49591 514 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms