RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 C5orf67F2Z3F1 127 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 JAK2O60674 1132 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 DKC1O60832 514 aaKnown RBP eCLIP15.06■□□□□ 0
VCX3A-202ENST00000398729 LINC00271P0C7V0 271 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 IRS1P35568 1242 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 PSMC5P62195 406 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
VCX3A-202ENST00000398729 NR5A1Q13285 461 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 TARBP2Q15633 366 aaKnown RBP15.06■□□□□ 0
VCX3A-202ENST00000398729 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 MTERF2Q49AM1 385 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 EARS2Q5JPH6 523 aaKnown RBP15.06■□□□□ 0
VCX3A-202ENST00000398729 HFE2Q6ZVN8 426 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 SLC24A5Q71RS6 500 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 FAM228AQ86W67 206 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 CLP1Q92989 425 aaKnown RBP15.06■□□□□ 0
VCX3A-202ENST00000398729 SCLT1Q96NL6 688 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 C11orf84Q9BUA3 381 aaPredicted RBP15.06■□□□□ 0
VCX3A-202ENST00000398729 RGS18Q9NS28 235 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 PRKAG3Q9UGI9 489 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 VAV3Q9UKW4 847 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 LIMCH1Q9UPQ0 1083 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 PCDHB7Q9Y5E2 793 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 TECTAO75443 2155 aa15.06■□□□□ 0
VCX3A-202ENST00000398729 ZDBF2Q9HCK1 2354 aa15.05■□□□□ 0
VCX3A-202ENST00000398729 ZFHX2Q9C0A1 2572 aaPredicted RBP15.05■□□□□ 0
VCX3A-202ENST00000398729 DDX11L8A8MPP1 907 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 EML1O00423 815 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 MGEA5O60502 916 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 BAG4O95429 457 aaKnown RBP15.05■□□□□ -0
VCX3A-202ENST00000398729 MMP1P03956 469 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 IBSPP21815 317 aaPredicted RBP15.05■□□□□ -0
VCX3A-202ENST00000398729 EIF4BP23588 611 aaKnown RBP15.05■□□□□ -0
VCX3A-202ENST00000398729 QARSP47897 775 aaKnown RBP15.05■□□□□ -0
VCX3A-202ENST00000398729 TIGD5Q53EQ6 642 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 ADHFE1Q8IWW8 467 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 SLFN12Q8IYM2 578 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 TNFRSF25Q93038 417 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 PLVAPQ9BX97 442 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
VCX3A-202ENST00000398729 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
VCX3A-202ENST00000398729 CACNA1HO95180 2353 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 TMEM150BA6NC51 233 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 FAM205CA6NFA0 338 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 C9IYK1 514 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 STBD1O95210 358 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 P4HBP07237 508 aaKnown RBP15.04■□□□□ -0
VCX3A-202ENST00000398729 DNM2P50570 870 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 GPC3P51654 580 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 FOSBP53539 338 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 CDC42EP1Q00587 391 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 PAN2Q504Q3 1202 aaKnown RBP15.04■□□□□ -0
VCX3A-202ENST00000398729 EP400NLQ6ZTU2 488 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 POTEDQ86YR6 584 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 DIS3L2Q8IYB7 885 aaKnown RBP15.04■□□□□ -0
VCX3A-202ENST00000398729 HAS1Q92839 578 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
VCX3A-202ENST00000398729 LMAN2LQ9H0V9 348 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 KCNH6Q9H252 994 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 CLDND1Q9NY35 253 aa15.04■□□□□ -0
VCX3A-202ENST00000398729 MRPL42Q9Y6G3 142 aaKnown RBP15.04■□□□□ -0
VCX3A-202ENST00000398729 CFAP54Q96N23 3096 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 BTBD18B2RXH4 712 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 GRM6O15303 877 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
VCX3A-202ENST00000398729 ZSCAN20P17040 1043 aaPredicted RBP15.03■□□□□ -0
VCX3A-202ENST00000398729 ST3GAL1Q11201 340 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 HYAL1Q12794 435 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 EPHA7Q15375 998 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 SMAD2Q15796 467 aaKnown RBP15.03■□□□□ -0
VCX3A-202ENST00000398729 C8orf34Q49A92 452 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 ANO5Q75V66 913 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 NLRP7Q8WX94 980 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 ZNF668Q96K58 619 aaPredicted RBP15.03■□□□□ -0
VCX3A-202ENST00000398729 CEP89Q96ST8 783 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 SH2D3AQ9BRG2 576 aa15.03■□□□□ -0
VCX3A-202ENST00000398729 IGKV6-21A0A0C4DH24 114 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 MAFO75444 373 aaPredicted RBP15.02■□□□□ -0
VCX3A-202ENST00000398729 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
VCX3A-202ENST00000398729 GATMP50440 423 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 DRP2Q13474 957 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 CAMK1Q14012 370 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 DSC3Q14574 896 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 SAFBQ15424 915 aaKnown RBP eCLIP15.02■□□□□ -0
VCX3A-202ENST00000398729 CLUL1Q15846 466 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 NAALADL2Q58DX5 795 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 PLA2G4FQ68DD2 849 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 NCAPH2Q6IBW4 605 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 P2RX5Q93086 422 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 ZSCAN31Q96LW9 406 aaPredicted RBP15.02■□□□□ -0
VCX3A-202ENST00000398729 PHOX2BQ99453 314 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 LLPHQ9BRT6 129 aaKnown RBP15.02■□□□□ -0
VCX3A-202ENST00000398729 GCOM2Q9BZD3 368 aaPredicted RBP15.02■□□□□ -0
VCX3A-202ENST00000398729 ELAC1Q9H777 363 aaKnown RBP15.02■□□□□ -0
VCX3A-202ENST00000398729 ATP6V0A4Q9HBG4 840 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 CYP26B1Q9NR63 512 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 TMEM161AQ9NX61 479 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms