RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 CDC26Q8NHZ8 85 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 DCAF4Q8WV16 495 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 RABGGTAQ92696 567 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 RMDN2Q96LZ7 410 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
PCDHGA8-201ENST00000398604 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.43
PCDHGA8-201ENST00000398604 ACSL3O95573 720 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 ARHGAP25P42331 645 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 PSMD2Q13200 908 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 BCL9O00512 1426 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 PFDN6O15212 129 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 FGGP02679 453 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 PSMA2P25787 234 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 PRELPP51888 382 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 TOPAZ1Q8N9V7 1692 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 MED7O43513 233 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZBED1O96006 694 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 MTMR2Q13614 643 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 ABCC6O95255 1503 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SERPING1P05155 500 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 MYL1P05976 194 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 TTC30AQ86WT1 665 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 MTRQ99707 1265 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 ATP6V0A4Q9HBG4 840 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
PCDHGA8-201ENST00000398604 LMNB2Q03252 620 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 EXT2Q93063 718 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 LXNQ9BS40 222 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 AK9Q5TCS8 1911 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 FCER1AP12319 257 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 ANXA13P27216 316 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 MSH2P43246 934 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZNF211Q13398 564 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 IQCB1Q15051 598 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 CCDC38Q502W7 563 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 FEM1BQ9UK73 627 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 PLSCR1O15162 318 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TEX33O43247 280 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 FMR1NBQ8N0W7 255 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TLK1Q9UKI8 766 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TNPO2O14787 897 aaKnown RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 RFC1P35251 1148 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 IFT88Q13099 833 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZNF699Q32M78 642 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 RESP18Q5W5W9 173 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TRIM68Q6AZZ1 485 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 SIK2Q9H0K1 926 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 IFT122Q9HBG6 1241 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
PCDHGA8-201ENST00000398604 HUS1O60921 280 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZRANB2O95218 330 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 MOCS2O96007 188 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 JAK3P52333 1124 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 COASYQ13057 564 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 FAM20AQ96MK3 541 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 RUNDC3BQ96NL0 473 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms