RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PROS1P07225 676 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 INSRRP14616 1297 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 PMLP29590 882 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 GBP2P32456 591 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-203ENST00000397378 SPEM2Q0P670 501 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 LETM2Q2VYF4 491 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 DCLRE1AQ6PJP8 1040 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 GPR149Q86SP6 731 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
NEDD9-203ENST00000397378 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
NEDD9-203ENST00000397378 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 GINS2Q9Y248 185 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 PCDHA2Q9Y5H9 948 aa10.79□□□□□ -0.68
NEDD9-203ENST00000397378 ERICH2A1L162 156 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 MAFGO15525 162 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 ITGB5P18084 799 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 TRDNQ13061 729 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 PTPN14Q15678 1187 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 LRRC55Q6ZSA7 311 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 PLEKHM2Q8IWE5 1019 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 ABI1Q8IZP0 508 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 LRRC43Q8N309 656 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 NME8Q8N427 588 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 SLC44A3Q8N4M1 653 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 AUTS2Q8WXX7 1259 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 PCYT2Q99447 389 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 MAP3K14Q99558 947 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 BCO2Q9BYV7 579 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 TMEM161AQ9NX61 479 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 ZSCAN32Q9NX65 697 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 ZMIZ1Q9ULJ6 1067 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
NEDD9-203ENST00000397378 ANKRD11Q6UB99 2663 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-203ENST00000397378 SPEGQ15772 3267 aa10.77□□□□□ -0.68
NEDD9-203ENST00000397378 SMIM35A0A1B0GVV1 85 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 C9IYK1 514 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
NEDD9-203ENST00000397378 TBC1D4O60343 1298 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 RPS6KA5O75582 802 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 METAP2P50579 478 aaKnown RBP eCLIP10.77□□□□□ -0.69
NEDD9-203ENST00000397378 KRT76Q01546 638 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 MTMR1Q13613 665 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 WTAPQ15007 396 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 LPAL2Q16609 132 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 SMC5Q8IY18 1101 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 VPS52Q8N1B4 723 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 SLC39A11Q8N1S5 342 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 ZBTB44Q8NCP5 570 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 DDX1Q92499 740 aaKnown RBP10.77□□□□□ -0.69
NEDD9-203ENST00000397378 TMEM117Q9H0C3 514 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 RAB23Q9ULC3 237 aa10.77□□□□□ -0.69
NEDD9-203ENST00000397378 FRYQ5TBA9 3013 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 NT5C1B-RDH14C9J2C7 533 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 HOXA2O43364 376 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 N4BP1O75113 896 aaKnown RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 SHC2P98077 582 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 N4BP2L1Q5TBK1 243 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 TSSK4Q6SA08 328 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 CATIPQ7Z7H3 387 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 SLC22A17Q8WUG5 538 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 STAMQ92783 540 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 TMEM169Q96HH4 297 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 SHDQ96IW2 340 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 ZBP1Q9H171 429 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 IL25Q9H293 177 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 AZI2Q9H6S1 392 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
NEDD9-203ENST00000397378 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-203ENST00000397378 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 LILRB5O75023 590 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 CYP21A2P08686 494 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 FAM189BP81408 668 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 GIT2Q14161 759 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 UBXN2BQ14CS0 331 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 PLCB4Q15147 1175 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 MTHFD1LQ6UB35 978 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 C15orf39Q6ZRI6 1047 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 PPFIBP1Q86W92 1011 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 CHD1LQ86WJ1 897 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 TRAPPC12Q8WVT3 735 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 NXPE3Q969Y0 559 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 ELAC1Q9H777 363 aaKnown RBP10.75□□□□□ -0.69
NEDD9-203ENST00000397378 PSTPIP2Q9H939 334 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms