RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SARSP49591 514 aaKnown RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 NPEPPSP55786 919 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 CYP4A11Q02928 519 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 ZNF410Q86VK4 478 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 FIBCD1Q8N539 461 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 NLRP7Q8WX94 980 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 ADAM2Q99965 735 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 GCOM2Q9BZD3 368 aaPredicted RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 RGS18Q9NS28 235 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 LMCD1Q9NZU5 365 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 SUCLA2Q9P2R7 463 aaPredicted RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
SEC13-208ENST00000397109 COL4A6Q14031 1691 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 H3BQV1 296 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 RFXAPO00287 272 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 DGKIO75912 1065 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
SEC13-208ENST00000397109 DARSP14868 501 aaKnown RBP16.26■□□□□ 0.19
SEC13-208ENST00000397109 POLGP54098 1239 aaPredicted RBP16.26■□□□□ 0.19
SEC13-208ENST00000397109 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
SEC13-208ENST00000397109 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
SEC13-208ENST00000397109 ANKEF1Q9NU02 776 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 RWDD3Q9Y3V2 267 aa16.26■□□□□ 0.19
SEC13-208ENST00000397109 ADGRA3Q8IWK6 1321 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 XRCC6P12956 609 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEC13-208ENST00000397109 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
SEC13-208ENST00000397109 GRB10Q13322 594 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 DRP2Q13474 957 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 MCTP1Q6DN14 999 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 SPRED2Q7Z698 418 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 CRIPAKQ8N1N5 446 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 FBXO22Q8NEZ5 403 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 TCP11Q8WWU5 503 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 TUFT1Q9NNX1 390 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 MTCH2Q9Y6C9 303 aa16.25■□□□□ 0.19
SEC13-208ENST00000397109 POTEMA6NI47 508 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 C9IYK1 514 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 ASAP2O43150 1006 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 MGEA5O60502 916 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 TECP42680 631 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 DSC3Q14574 896 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 EPC2Q52LR7 807 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 RHPN2Q8IUC4 686 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC13-208ENST00000397109 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 PSPC1Q8WXF1 523 aaKnown RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 C17orf80Q9BSJ5 609 aa16.24■□□□□ 0.19
SEC13-208ENST00000397109 RC3H2Q9HBD1 1191 aaKnown RBP16.24■□□□□ 0.19
SEC13-208ENST00000397109 A0A087WZ62 844 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 LPXNO60711 386 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 RB1P06400 928 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 PDCP20941 246 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 FAM189BP81408 668 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 ZNF668Q96K58 619 aaPredicted RBP16.23■□□□□ 0.19
SEC13-208ENST00000397109 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 FDXACB1Q9BRP7 624 aaPredicted RBP16.23■□□□□ 0.19
SEC13-208ENST00000397109 POLR3CQ9BUI4 534 aaPredicted RBP16.23■□□□□ 0.19
SEC13-208ENST00000397109 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
SEC13-208ENST00000397109 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 TRANK1O15050 2925 aa16.23■□□□□ 0.19
SEC13-208ENST00000397109 LAD1O00515 517 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 ZBTB39O15060 712 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 DGAT1O75907 488 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 MUTP22033 750 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 SFPQP23246 707 aaKnown RBP eCLIP16.22■□□□□ 0.19
SEC13-208ENST00000397109 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 EMC2Q15006 297 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 RILPL1Q5EBL4 403 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 MICALL1Q8N3F8 863 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 MTRQ99707 1265 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 CHST12Q9NRB3 414 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 H3BNC9 293 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 SPATA31C1P0DKV0 1188 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 RPA1P27694 616 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms