RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 GRXCR1A8MXD5 290 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 ASAP2O43150 1006 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 AMHP03971 560 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 NFX1Q12986 1120 aaKnown RBP23.27■■□□□ 1.32
SEC13-207ENST00000397105 PADI6Q6TGC4 694 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 ZNF410Q86VK4 478 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 LRCH3Q96II8 777 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 CDK5RAP3Q96JB5 506 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 GCOM2Q9BZD3 368 aaPredicted RBP23.27■■□□□ 1.32
SEC13-207ENST00000397105 NT5C3AQ9H0P0 336 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 ST3GAL5Q9UNP4 418 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 SRPRBQ9Y5M8 271 aaKnown RBP23.27■■□□□ 1.32
SEC13-207ENST00000397105 COL4A3BPQ9Y5P4 624 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 TET1Q8NFU7 2136 aa23.27■■□□□ 1.32
SEC13-207ENST00000397105 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 USO1O60763 962 aaKnown RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 MXD4Q14582 209 aaPredicted RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 STK38Q15208 465 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 GPR153Q6NV75 609 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.26■■□□□ 1.312e-23■■■■■ 54.1
SEC13-207ENST00000397105 CABP7Q86V35 215 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 HERC6Q8IVU3 1022 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 MCPH1Q8NEM0 835 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 ZNF668Q96K58 619 aaPredicted RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 BHMT2Q9H2M3 363 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 ERVK-5Q9HDB9 667 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 XPNPEP1Q9NQW7 623 aa23.26■■□□□ 1.31
SEC13-207ENST00000397105 TFIP11Q9UBB9 837 aaKnown RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 FBXO2Q9UK22 296 aaPredicted RBP23.26■■□□□ 1.31
SEC13-207ENST00000397105 A0A087WZ62 844 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 EYA4O95677 639 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 BRD1O95696 1058 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 DARSP14868 501 aaKnown RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 GRIN1Q05586 938 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 LAMTOR4Q0VGL1 99 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 RAB30Q15771 203 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 FOXD4L6Q3SYB3 417 aaPredicted RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 HYIQ5T013 277 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 ATL3Q6DD88 541 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 FOXD4L3Q6VB84 417 aaPredicted RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 KSR1Q8IVT5 923 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 CALML4Q96GE6 196 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 NLRP4Q96MN2 994 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 FDXACB1Q9BRP7 624 aaPredicted RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 INO80BQ9C086 356 aaPredicted RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 CSRNP2Q9H175 543 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
SEC13-207ENST00000397105 MSRAQ9UJ68 235 aa23.25■■□□□ 1.31
SEC13-207ENST00000397105 E9PMD0 336 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 ENPP3O14638 875 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 SRGAP2CP0DJJ0 459 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 CYP11B2P19099 503 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 ARL2P36404 184 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 DEFB103AP81534 67 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 FAM228AQ86W67 206 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 MYOCDQ8IZQ8 938 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
SEC13-207ENST00000397105 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 PNMA5Q96PV4 448 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 ZBED2Q9BTP6 218 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 PBX4Q9BYU1 374 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
SEC13-207ENST00000397105 EVPLQ92817 2033 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.23■■□□□ 1.31
SEC13-207ENST00000397105 SPTLC2O15270 562 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 YEATS4O95619 227 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 RABGGTBP53611 331 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 GRB10Q13322 594 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 TFDP1Q14186 410 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 PLIN2Q99541 437 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 TMX1Q9H3N1 280 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 PCDHA11Q9Y5I1 949 aa23.23■■□□□ 1.31
SEC13-207ENST00000397105 PBX2P40425 430 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 FAM102BQ5T8I3 360 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 MAEAQ7L5Y9 396 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 RNF149Q8NC42 400 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 CCSER1Q9C0I3 900 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 POLR3FQ9H1D9 316 aaPredicted RBP23.22■■□□□ 1.31
SEC13-207ENST00000397105 TSPYL2Q9H2G4 693 aaPredicted RBP23.22■■□□□ 1.31
SEC13-207ENST00000397105 ZDHHC9Q9Y397 364 aa23.22■■□□□ 1.31
SEC13-207ENST00000397105 SZT2Q5T011 3432 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 DENND3A2RUS2 1198 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 PPP6R2O75170 966 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 GJB5O95377 273 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 SFPQP23246 707 aaKnown RBP eCLIP23.21■■□□□ 1.31
SEC13-207ENST00000397105 DNAJB2P25686 324 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 TMEM119Q4V9L6 283 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 KCNK18Q7Z418 384 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 SRGAP1Q7Z6B7 1085 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 TMCO2Q7Z6W1 182 aaPredicted RBP23.21■■□□□ 1.31
SEC13-207ENST00000397105 RTN4RL1Q86UN2 441 aaPredicted RBP23.21■■□□□ 1.31
SEC13-207ENST00000397105 TOP1MTQ969P6 601 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 TIFAQ96CG3 184 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 IFT122Q9HBG6 1241 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 ATP6V1DQ9Y5K8 247 aa23.21■■□□□ 1.31
SEC13-207ENST00000397105 TLL1O43897 1013 aa23.2■■□□□ 1.3
SEC13-207ENST00000397105 CSDE1O75534 798 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms