RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 CWH43Q9H720 699 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 C6orf50Q9HD87 102 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 TYW1Q9NV66 732 aaKnown RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 VPS54Q9P1Q0 977 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 CD207Q9UJ71 328 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 DENND3A2RUS2 1198 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 TMEM150BA6NC51 233 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 MSH4O15457 936 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 CSDE1O75534 798 aaKnown RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 FGF18O76093 207 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 EYA4O95677 639 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 FGFR4P22455 802 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 CIITAP33076 1130 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 PBX3P40426 434 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 CRYBB1P53674 252 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 SSRP1Q08945 709 aaKnown RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 DRP2Q13474 957 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 HFE2Q6ZVN8 426 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 SMRP1Q8NCR6 262 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.54
NEDD8-202ENST00000396828 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 ADAMTS10Q9H324 1103 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 CHMP5Q9NZZ3 219 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 PCDHA10Q9Y5I2 948 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 TECTAO75443 2155 aa11.65□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.55
NEDD8-202ENST00000396828 GPR182O15218 404 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 CHMP2AO43633 222 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 DTNBO60941 627 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 PSAPP07602 524 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 IFNAR1P17181 557 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 NUCB2P80303 420 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-202ENST00000396828 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
NEDD8-202ENST00000396828 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
NEDD8-202ENST00000396828 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 SMAP1Q8IYB5 467 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-202ENST00000396828 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 WASF1Q92558 559 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 SH2D3AQ9BRG2 576 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 TLE6Q9H808 572 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 C1orf112Q9NSG2 853 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 CDH22Q9UJ99 828 aa11.64□□□□□ -0.55
NEDD8-202ENST00000396828 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 FSCN2O14926 492 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 JAK2O60674 1132 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 STBD1O95210 358 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 GNA11P29992 359 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 DDIT3P35638 169 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 PRKCEQ02156 737 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 COASYQ13057 564 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-202ENST00000396828 LARP1BQ659C4 914 aaKnown RBP11.63□□□□□ -0.55
NEDD8-202ENST00000396828 SLC5A5Q92911 643 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-202ENST00000396828 UNC45AQ9H3U1 944 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 TMEM161AQ9NX61 479 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 ORC3Q9UBD5 711 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-202ENST00000396828 AKT3Q9Y243 479 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 USP15Q9Y4E8 981 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-202ENST00000396828 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 VPS13AQ96RL7 3174 aa11.63□□□□□ -0.55
NEDD8-202ENST00000396828 HIDE1A8MVS5 230 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 WDR64B1ANS9 1081 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 LOC730098B7Z3J9 87 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 DEXIO95424 95 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 TDP2O95551 362 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 OATP04181 439 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 EIF4BP23588 611 aaKnown RBP11.62□□□□□ -0.55
NEDD8-202ENST00000396828 GPC3P51654 580 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 KCNC3Q14003 757 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 NPY5RQ15761 445 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 DUSP6Q16828 381 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
NEDD8-202ENST00000396828 PLPP4Q5VZY2 271 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms