RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 KIAA1841Q6NSI8 718 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 EXOC8Q8IYI6 725 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ARL8AQ96BM9 186 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 SPTLC3Q9NUV7 552 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TRIM13O60858 407 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 DTNBO60941 627 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CYP4A11Q02928 519 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PRKG1Q13976 671 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TBC1D10BQ4KMP7 808 aaPredicted RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 NPATQ14207 1427 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ASAP2O43150 1006 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ALAS1P13196 640 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TIMM10P62072 90 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 POU5F1BQ06416 359 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TRAPPC3LQ5T215 181 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 INPP5DQ92835 1189 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 KMT5AQ9NQR1 393 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ADAM21Q9UKJ8 722 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PCDHA5Q9Y5H7 936 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CLIC4Q9Y696 253 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CLK1P49759 484 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 KLC1Q07866 573 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 DDB1Q16531 1140 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 WDR48Q8TAF3 677 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ACCSQ96QU6 501 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 HPCAL4Q9UM19 191 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CFAP69A5D8W1 941 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 PGM1P36871 562 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 IFT43Q96FT9 208 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 ZNF274Q96GC6 653 aaPredicted RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 UBE4BO95155 1302 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 TSC22D2O75157 780 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 FBLN1P23142 703 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 EGFL8Q99944 293 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 SPDYE5A6NIY4 337 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 NDUFA10O95299 355 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 SPDYE7PQ495Y7 208 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 RFWD2Q8NHY2 731 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 MAGEB5Q9BZ81 275 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 CAPZA2P47755 286 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 TP53BP2Q13625 1128 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 NLRP14Q86W24 1093 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 OLFML3Q9NRN5 406 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 KLHL8Q9P2G9 620 aaPredicted RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 FAM32AQ9Y421 112 aaKnown RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 PDCD6IPQ8WUM4 868 aaKnown RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 EME1Q96AY2 570 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 CD58P19256 250 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 KRR1Q13601 381 aaKnown RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 SOX6P35712 828 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 KRT31Q15323 416 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 PLA2G4DQ86XP0 818 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
COL4A4-201ENST00000396625 TSR3Q9UJK0 312 aaKnown RBP10.98□□□□□ -0.65
COL4A4-201ENST00000396625 CDC27P30260 824 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 SNAP25P60880 206 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 TTC30AQ86WT1 665 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CYP26B1Q9NR63 512 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CSADQ9Y600 493 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 MEFVO15553 781 aaPredicted RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 DAB2IPQ5VWQ8 1189 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 SLC7A3Q8WY07 619 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 P2RX5Q93086 422 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CCDC22O60826 627 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 FASTKD1Q53R41 847 aaKnown RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 LRRC47Q8N1G4 583 aaKnown RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 LPIN2Q92539 896 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 VPS11Q9H270 941 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CLCA2Q9UQC9 943 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 PMS2P54278 862 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 MIS18BP1Q6P0N0 1132 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CLEC4FQ8N1N0 589 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 CTIFO43310 598 aaKnown RBP10.97□□□□□ -0.65
COL4A4-201ENST00000396625 AKAP10O43572 662 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 DPCR1Q3MIW9 517 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 GADL1Q6ZQY3 521 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 ANKS3Q6ZW76 656 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 C7orf31Q8N865 590 aa10.97□□□□□ -0.65
COL4A4-201ENST00000396625 OMA1Q96E52 524 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms