RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PCDHA10Q9Y5I2 948 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 CSADQ9Y600 493 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 KCNA2P16389 499 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 GNPTABQ3T906 1256 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 XKR9Q5GH70 373 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
CBX3-202ENST00000396386 PLA2G4FQ68DD2 849 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 SULF1Q8IWU6 871 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 ATP6V0A1Q93050 837 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 DUSP10Q9Y6W6 482 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 TMEM150BA6NC51 233 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 ADM5C9JUS6 153 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 EXOC3O60645 756 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 CLCN6P51797 869 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 UTP14CQ5TAP6 766 aaKnown RBP16.35■□□□□ 0.21
CBX3-202ENST00000396386 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 ALS2CR12Q96Q35 445 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 ST6GALNAC4Q9H4F1 302 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 SAR1BQ9Y6B6 198 aa16.35■□□□□ 0.21
CBX3-202ENST00000396386 POTEB2H3BUK9 544 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 ENC1O14682 589 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 FMO5P49326 533 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 NCKAP1LP55160 1127 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 ARID5AQ03989 594 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 IWS1Q96ST2 819 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
CBX3-202ENST00000396386 JPH1Q9HDC5 661 aaPredicted RBP16.34■□□□□ 0.21
CBX3-202ENST00000396386 BZW2Q9Y6E2 419 aaKnown RBP16.34■□□□□ 0.21
CBX3-202ENST00000396386 RGS20O76081 388 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 PSAPP07602 524 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 MYL7Q01449 175 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 CKAP4Q07065 602 aaKnown RBP16.33■□□□□ 0.21
CBX3-202ENST00000396386 BFSP1Q12934 665 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 OTUD6AQ7L8S5 288 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 HAUS6Q7Z4H7 955 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 HDAC6Q9UBN7 1215 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 CAPN6Q9Y6Q1 641 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 PFASO15067 1338 aa16.33■□□□□ 0.21
CBX3-202ENST00000396386 MOCS3O95396 460 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 KRT13P13646 458 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.2
CBX3-202ENST00000396386 NPEPPSP55786 919 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 JAM2P57087 298 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.2
CBX3-202ENST00000396386 GTF2BQ00403 316 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 FAM102BQ5T8I3 360 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 ANO5Q75V66 913 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 DNERQ8NFT8 737 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 SH2D3AQ9BRG2 576 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 GPRC5CQ9NQ84 441 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 SLC9A2Q9UBY0 812 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.2
CBX3-202ENST00000396386 JRKLQ9Y4A0 524 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 DAAM1Q9Y4D1 1078 aa16.33■□□□□ 0.2
CBX3-202ENST00000396386 MYH9P35579 1960 aaKnown RBP16.33■□□□□ 0.2
CBX3-202ENST00000396386 SPATA31C2B4DYI2 1134 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
CBX3-202ENST00000396386 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 ZSCAN20P17040 1043 aaPredicted RBP16.32■□□□□ 0.2
CBX3-202ENST00000396386 ANXA13P27216 316 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 PRKCIP41743 596 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 PEX3P56589 373 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
CBX3-202ENST00000396386 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
CBX3-202ENST00000396386 SLC16A4O15374 487 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 IRF2BP2Q7Z5L9 587 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 EPC1Q9H2F5 836 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 A0A087X0T9 212 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 ZNF862O60290 1169 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms