RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 CHRNA3P32297 505 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 CASP5P51878 434 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 DCAF12L1Q5VU92 463 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 BICDL1Q6ZP65 573 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 SFR1Q86XK3 245 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 ADGRF4Q8IZF3 695 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 MDM1Q8TC05 714 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 PSTPIP2Q9H939 334 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 EBF2Q9HAK2 575 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 MTRF1LQ9UGC7 380 aaKnown RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 ASTN1O14525 1302 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 SPATA31A1Q5TZJ5 1347 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 PODXLO00592 558 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 BACH1O14867 736 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 EVI5O60447 810 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 PHF2O75151 1096 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 CACNB1Q02641 598 aaPredicted RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 GABPAQ06546 454 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 MAB21L3Q8N8X9 362 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 MARCH10Q8NA82 808 aaPredicted RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 SLC35G2Q8TBE7 412 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 INTS9Q9NV88 658 aaKnown RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 PCYOX1Q9UHG3 505 aa9.42□□□□□ -0.9
BDNF-204ENST00000395980 AJAP1Q9UKB5 411 aaPredicted RBP9.42□□□□□ -0.9
BDNF-204ENST00000395980 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 TTLL1O95922 423 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 RPA1P27694 616 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 PPP1R7Q15435 360 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 HIBCHQ6NVY1 386 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 TRPM8Q7Z2W7 1104 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 BORCS6Q96GS4 357 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 DNM3Q9UQ16 869 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 PFASO15067 1338 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 FRMPD4Q14CM0 1322 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
BDNF-204ENST00000395980 GAP43P17677 238 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 RFX1P22670 979 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 AP3B2Q13367 1082 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 C11orf63Q6NUN7 778 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 TAOK1Q7L7X3 1001 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 RHOT2Q8IXI1 618 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 GBP7Q8N8V2 638 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 PROCA1Q8NCQ7 364 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 SELENOSQ9BQE4 189 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 REEP2Q9BRK0 252 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 OLFML3Q9NRN5 406 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 NRAPQ86VF7 1730 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ANKRD62A6NC57 917 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 OPLAHO14841 1288 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 SHBGP04278 402 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ALADP13716 330 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 VCAM1P19320 739 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 PTGIRP43119 386 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 PDE6CP51160 858 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ZNF131P52739 623 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 SPIRE1Q08AE8 756 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 GRAPQ13588 217 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 SLC15A2Q16348 729 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 TCERG1LQ5VWI1 586 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 LRRC34Q8IZ02 419 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 RSRC1Q96IZ7 334 aaKnown RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 PLCD4Q9BRC7 762 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 ROPN1BQ9BZX4 212 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 ROPN1Q9HAT0 212 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 LRRC4CQ9HCJ2 640 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 BATF3Q9NR55 127 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 GRHL1Q9NZI5 618 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.41□□□□□ -0.9
BDNF-204ENST00000395980 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
BDNF-204ENST00000395980 POTEFA5A3E0 1075 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 PTPROQ16827 1216 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
BDNF-204ENST00000395980 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 MOV10L1Q9BXT6 1211 aaKnown RBP9.4□□□□□ -0.9
BDNF-204ENST00000395980 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 TRIM31Q9BZY9 425 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 OSGEPQ9NPF4 335 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 GREB1LQ9C091 1923 aaPredicted RBP9.4□□□□□ -0.9
BDNF-204ENST00000395980 UBE4BO95155 1302 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 RPTORQ8N122 1335 aa9.4□□□□□ -0.9
BDNF-204ENST00000395980 ATP2C2O75185 946 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms