RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 TAF1BQ53T94 588 aaPredicted RBP18.57■□□□□ 0.56
UBFD1-201ENST00000395878 CATSPER4Q7RTX7 472 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 DONSONQ9NYP3 566 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 FAM8A1Q9UBU6 413 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 SCOCQ9UIL1 159 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 COPEO14579 308 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 CHEK2O96017 543 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 SLC4A1P02730 911 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 SFNP31947 248 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 PEX19P40855 299 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 DYDC2Q96IM9 177 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 PPP1R16BQ96T49 567 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 ADGRG1Q9Y653 693 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 COL15A1P39059 1388 aa18.57■□□□□ 0.56
UBFD1-201ENST00000395878 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
UBFD1-201ENST00000395878 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 POTECB2RU33 542 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 NMT2O60551 498 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 KRT38O76015 456 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 LAMC1P11047 1609 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 A0A1W2PQC6 194 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 ELAC2Q9BQ52 826 aaKnown RBP18.56■□□□□ 0.56
UBFD1-201ENST00000395878 TRIM55Q9BYV6 548 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 ORC4O43929 436 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 MORC4Q8TE76 937 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 CPVLQ9H3G5 476 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 CACNB3P54284 484 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 EPHB1P54762 984 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 NAALADL2Q58DX5 795 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 OSBPL9Q96SU4 736 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 KIF9Q9HAQ2 790 aa18.56■□□□□ 0.56
UBFD1-201ENST00000395878 NVLO15381 856 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 P4HBP07237 508 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TBXAS1P24557 533 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PMLP29590 882 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 ZNF699Q32M78 642 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 WDR75Q8IWA0 830 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 ADAM21Q9UKJ8 722 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 F8W8V4 182 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 RXRBP28702 533 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PPARGP37231 505 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 ARPP19P56211 112 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 MRPS25P82663 173 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PDCLQ13371 301 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TERF2Q15554 542 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PPP6R3Q5H9R7 873 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TRIM67Q6ZTA4 783 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 DHX40Q8IX18 779 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TRAIPQ9BWF2 469 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TOPORSQ9NS56 1045 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 PAMP19021 973 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TAC1P20366 129 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 ATP2C1P98194 919 aaPredicted RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 SLC12A1Q13621 1099 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 KLHL38Q2WGJ6 581 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 CCDC144BQ3MJ40 725 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 CHMP6Q96FZ7 201 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 FAM96AQ9H5X1 160 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 FRMD3A2A2Y4 597 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 HSPA4LO95757 839 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 CIITAP33076 1130 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 VAMP7P51809 220 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 SLC44A5Q8NCS7 719 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 CCDC124Q96CT7 223 aaKnown RBP18.55■□□□□ 0.56
UBFD1-201ENST00000395878 TMEM260Q9NX78 707 aa18.55■□□□□ 0.56
UBFD1-201ENST00000395878 RASA4BC9J798 803 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 SLC16A4O15374 487 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 RASA4O43374 803 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 PHKA2P46019 1235 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 TMEM270Q6UE05 265 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 RNF168Q8IYW5 571 aaPredicted RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 LRRC43Q8N309 656 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 ZNF564Q8TBZ8 553 aaPredicted RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 INTS2Q9H0H0 1204 aaKnown RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 TMPRSS15P98073 1019 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 PDLIM2Q96JY6 352 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 FGD4Q96M96 766 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 SNAP23O00161 211 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 CHRNA3P32297 505 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 QARSP47897 775 aaKnown RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.565e-8■□□□□ 9.8
UBFD1-201ENST00000395878 HEMGNQ9BXL5 484 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 UPF3AQ9H1J1 476 aaKnown RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 CTIFO43310 598 aaKnown RBP18.54■□□□□ 0.56
UBFD1-201ENST00000395878 ZNF394Q53GI3 561 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 SHC4Q6S5L8 630 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 CCDC138Q96M89 665 aa18.54■□□□□ 0.56
UBFD1-201ENST00000395878 FAM213AQ9BRX8 229 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms