RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 KIF22Q14807 665 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 CRY2Q49AN0 593 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 DEPDC1Q5TB30 811 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 PPFIBP2Q8ND30 876 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 SUN5Q8TC36 379 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 RUBCNQ92622 972 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 DHX36Q9H2U1 1008 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 GREM2Q9H772 168 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 CCPG1Q9ULG6 757 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TTC7AQ9ULT0 858 aaPredicted RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 PCDHB2Q9Y5E7 798 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 KANSL1LA0AUZ9 987 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 IFIT3O14879 490 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 MSH2P43246 934 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 SERPINB8P50452 374 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 RAD23BP54727 409 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 ADKP55263 362 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 TRIM29Q14134 588 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 MTF1Q14872 753 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 RASA2Q15283 850 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 DAB2IPQ5VWQ8 1189 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 SPERTQ8NA61 448 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TSEN2Q8NCE0 465 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 CCDC110Q8TBZ0 833 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 SDF4Q9BRK5 362 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 NIP7Q9Y221 180 aaKnown RBP eCLIP9.59□□□□□ -0.87
MSH5-205ENST00000395853 LUC7L2Q9Y383 392 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 MAGEA13PA6NCF6 341 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 SPTLC2O15270 562 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 LDHCP07864 332 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 CYP2C9P11712 490 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 ITGA6P23229 1130 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 PSMA5P28066 241 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TKTP29401 623 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 ACADVLP49748 655 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 FKBP15Q5T1M5 1219 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TMC4Q7Z404 712 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 FAM20CQ8IXL6 584 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 CYP4X1Q8N118 509 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 FAM133AQ8N9E0 248 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 PPP1R14CQ8TAE6 165 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 ACMSDQ8TDX5 336 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 MMS19Q96T76 1030 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 CENPKQ9BS16 269 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 PARVGQ9HBI0 331 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 TRPC7Q9HCX4 862 aa9.59□□□□□ -0.87
MSH5-205ENST00000395853 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 SEC63Q9UGP8 760 aaKnown RBP9.59□□□□□ -0.87
MSH5-205ENST00000395853 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 A8MUI8 341 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 IGF2BP3O00425 579 aaKnown RBP eCLIP9.58□□□□□ -0.88
MSH5-205ENST00000395853 APOEP02649 317 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 CALB2P22676 271 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 POU5F1Q01860 360 aaKnown RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 SPIDRQ14159 915 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 SCARF1Q14162 830 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 WDR45BQ5MNZ6 344 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 PPFIBP1Q86W92 1011 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 CCDC28BQ9BUN5 200 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 PLCB1Q9NQ66 1216 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 FAIMQ9NVQ4 179 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 LARSQ9P2J5 1176 aaKnown RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 SAP30BPQ9UHR5 308 aaKnown RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 GTF3C4Q9UKN8 822 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 LAMA4Q16363 1823 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 SOWAHDA6NJG2 315 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 ZNF233A6NK53 670 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 ERVV-1B6SEH8 477 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 TJP3O95049 919 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 CYP21A2P08686 494 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 SKIP12755 728 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 SERPINB3P29508 390 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 HPDP32754 393 aaPredicted RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 FOSBP53539 338 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 CTSWP56202 376 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 MRPS25P82663 173 aaKnown RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 ZBTB17Q13105 803 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
MSH5-205ENST00000395853 E2F2Q14209 437 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 CRY1Q16526 586 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 MUM1Q2TAK8 710 aa9.58□□□□□ -0.88
MSH5-205ENST00000395853 FAM133BQ5BKY9 247 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms