RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ST6GALNAC4Q9H4F1 302 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 DDX20Q9UHI6 824 aaKnown RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 MAPK8IP1Q9UQF2 711 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 SFI1A8K8P3 1242 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 INHAP05111 366 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 GNAT1P11488 350 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 BMT2Q1RMZ1 405 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 RNF180Q86T96 592 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 NTPCRQ9BSD7 190 aaKnown RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 TMEM206Q9H813 350 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 TBC1D7Q9P0N9 293 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 K7ENM7 598 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 ASAP2O43150 1006 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 AP5Z1O43299 807 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 MYL3P08590 195 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 INSRRP14616 1297 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
VAPB-202ENST00000395802 CCND3P30281 292 aaPredicted RBP15.09■□□□□ 0.01
VAPB-202ENST00000395802 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 MAPK7Q13164 816 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 DAW1Q8N136 415 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 ANKRD20A12PQ8NF67 263 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 GOLGA5Q8TBA6 731 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 PSPC1Q8WXF1 523 aaKnown RBP15.09■□□□□ 0.01
VAPB-202ENST00000395802 HPS3Q969F9 1004 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 HVCN1Q96D96 273 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 CEP89Q96ST8 783 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 MTG1Q9BT17 334 aaPredicted RBP15.09■□□□□ 0.01
VAPB-202ENST00000395802 POLR3FQ9H1D9 316 aaPredicted RBP15.09■□□□□ 0.01
VAPB-202ENST00000395802 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 PTPN22Q9Y2R2 807 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 NFE2L3Q9Y4A8 694 aa15.09■□□□□ 0.01
VAPB-202ENST00000395802 IGKV6-21A0A0C4DH24 114 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 CCDC169A6NNP5 214 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 PTGS1P23219 599 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 NAMPTP43490 491 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 PEX3P56589 373 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 CDC42EP1Q00587 391 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 TRIM32Q13049 653 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 MFSD10Q14728 455 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 KNOP1Q1ED39 458 aaKnown RBP15.08■□□□□ 0.01
VAPB-202ENST00000395802 EPM2AIP1Q7L775 607 aaPredicted RBP15.08■□□□□ 0.01
VAPB-202ENST00000395802 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 SCFD1Q8WVM8 642 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 KMT5AQ9NQR1 393 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 XPNPEP1Q9NQW7 623 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 PTCH2Q9Y6C5 1203 aa15.08■□□□□ 0.01
VAPB-202ENST00000395802 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
VAPB-202ENST00000395802 CABYRO75952 493 aa15.08■□□□□ 0
VAPB-202ENST00000395802 CDK11BP21127 795 aaKnown RBP15.08■□□□□ 0
VAPB-202ENST00000395802 ARL2P36404 184 aa15.08■□□□□ 0
VAPB-202ENST00000395802 NCKAP1LP55160 1127 aa15.08■□□□□ 0
VAPB-202ENST00000395802 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
VAPB-202ENST00000395802 PURAQ00577 322 aaKnown RBP15.08■□□□□ 0
VAPB-202ENST00000395802 SPAG1Q07617 926 aa15.08■□□□□ 0
VAPB-202ENST00000395802 TFDP1Q14186 410 aa15.08■□□□□ 0
VAPB-202ENST00000395802 HS2ST1Q7LGA3 356 aa15.08■□□□□ 0
VAPB-202ENST00000395802 ZNF710Q8N1W2 664 aa15.08■□□□□ 0
VAPB-202ENST00000395802 LENG1Q96BZ8 264 aaPredicted RBP15.08■□□□□ 0
VAPB-202ENST00000395802 SUGCTQ9HAC7 445 aa15.08■□□□□ 0
VAPB-202ENST00000395802 GPRC5CQ9NQ84 441 aa15.08■□□□□ 0
VAPB-202ENST00000395802 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
VAPB-202ENST00000395802 ARID2Q68CP9 1835 aa15.07■□□□□ 0
VAPB-202ENST00000395802 ZBTB42B2RXF5 422 aa15.07■□□□□ 0
VAPB-202ENST00000395802 PDXKO00764 312 aa15.07■□□□□ 0
VAPB-202ENST00000395802 ADAMTS4O75173 837 aa15.07■□□□□ 0
VAPB-202ENST00000395802 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
VAPB-202ENST00000395802 NPTX2P47972 431 aa15.07■□□□□ 0
VAPB-202ENST00000395802 PSEN2P49810 448 aa15.07■□□□□ 0
VAPB-202ENST00000395802 STX17P56962 302 aa15.07■□□□□ 0
VAPB-202ENST00000395802 BEX3Q00994 111 aa15.07■□□□□ 0
VAPB-202ENST00000395802 NCAPHQ15003 741 aa15.07■□□□□ 0
VAPB-202ENST00000395802 LRRC41Q15345 812 aa15.07■□□□□ 0
VAPB-202ENST00000395802 GRIK4Q16099 956 aa15.07■□□□□ 0
VAPB-202ENST00000395802 SLC9C1Q4G0N8 1177 aa15.07■□□□□ 0
VAPB-202ENST00000395802 EFCAB12Q6NXP0 572 aa15.07■□□□□ 0
VAPB-202ENST00000395802 HAUS6Q7Z4H7 955 aa15.07■□□□□ 0
VAPB-202ENST00000395802 CSGALNACT2Q8N6G5 542 aa15.07■□□□□ 0
VAPB-202ENST00000395802 METTL13Q8N6R0 699 aa15.07■□□□□ 0
VAPB-202ENST00000395802 C7orf31Q8N865 590 aa15.07■□□□□ 0
VAPB-202ENST00000395802 KCNN1Q92952 543 aa15.07■□□□□ 0
VAPB-202ENST00000395802 TMEM143Q96AN5 459 aa15.07■□□□□ 0
VAPB-202ENST00000395802 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
VAPB-202ENST00000395802 MYH11P35749 1972 aa15.07■□□□□ 0
VAPB-202ENST00000395802 HAS3O00219 553 aa15.06■□□□□ 0
VAPB-202ENST00000395802 ADCY5O95622 1261 aa15.06■□□□□ 0
VAPB-202ENST00000395802 PGK1P00558 417 aa15.06■□□□□ 0
VAPB-202ENST00000395802 RPLP2P05387 115 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 TPM3P06753 285 aa15.06■□□□□ 0
VAPB-202ENST00000395802 KLRC1P26715 233 aa15.06■□□□□ 0
VAPB-202ENST00000395802 NMT1P30419 496 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 EFNA5P52803 228 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms