RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DNM1Q05193 864 aaKnown RBP18.43■□□□□ 0.54
CXCL1-201ENST00000395761 STK38Q15208 465 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 HYIQ5T013 277 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 PADI6Q6TGC4 694 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
CXCL1-201ENST00000395761 USP49Q70CQ1 688 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 CABP7Q86V35 215 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 EXOC8Q8IYI6 725 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 LRCH3Q96II8 777 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 MTRQ99707 1265 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 MTIF3Q9H2K0 278 aaKnown RBP18.43■□□□□ 0.54
CXCL1-201ENST00000395761 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 ATP6V0A4Q9HBG4 840 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 ARHGEF35A5YM69 484 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 CSDE1O75534 798 aaKnown RBP18.42■□□□□ 0.54
CXCL1-201ENST00000395761 UBA7P41226 1012 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 DEFB103AP81534 67 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 MAEAQ7L5Y9 396 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 TMCO2Q7Z6W1 182 aaPredicted RBP18.42■□□□□ 0.54
CXCL1-201ENST00000395761 USP38Q8NB14 1042 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 APBB2Q92870 758 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 EPSTI1Q96J88 318 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 TMX1Q9H3N1 280 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 DNM3Q9UQ16 869 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
CXCL1-201ENST00000395761 ARID2Q68CP9 1835 aa18.42■□□□□ 0.54
CXCL1-201ENST00000395761 A0A087WZ62 844 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 SPTLC2O15270 562 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 RPS6KA5O75582 802 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 EYA4O95677 639 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 SRGAP2CP0DJJ0 459 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 ARL2P36404 184 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 FXR1P51114 621 aaKnown RBP eCLIP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 LAMTOR4Q0VGL1 99 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 NFX1Q12986 1120 aaKnown RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 PAK2Q13177 524 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 TMEM119Q4V9L6 283 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 RTN4RL1Q86UN2 441 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 FAM228AQ86W67 206 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 KRI1Q8N9T8 703 aaKnown RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 ASAP3Q8TDY4 903 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 LRRC15Q8TF66 581 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 TCP11Q8WWU5 503 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 NLRP7Q8WX94 980 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 PSPC1Q8WXF1 523 aaKnown RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 NLRP4Q96MN2 994 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 SCLT1Q96NL6 688 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-201ENST00000395761 POLD4Q9HCU8 107 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 ERVK-5Q9HDB9 667 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 GPRC5CQ9NQ84 441 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 ST3GAL5Q9UNP4 418 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 COL4A3BPQ9Y5P4 624 aa18.41■□□□□ 0.54
CXCL1-201ENST00000395761 ENPP3O14638 875 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 GAS2O43903 313 aaKnown RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 YEATS4O95619 227 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 DARSP14868 501 aaKnown RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 ATP2A2P16615 1042 aaKnown RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 CYP11B2P19099 503 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 FGFR4P22455 802 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 EIF4BP23588 611 aaKnown RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 RABGGTBP53611 331 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 CDC42EP1Q00587 391 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 KARSQ15046 597 aaKnown RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 ZNF710Q8N1W2 664 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 POLR3FQ9H1D9 316 aaPredicted RBP18.4■□□□□ 0.54
CXCL1-201ENST00000395761 IFT122Q9HBG6 1241 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 MYH15Q9Y2K3 1946 aa18.4■□□□□ 0.54
CXCL1-201ENST00000395761 LAMA3Q16787 3333 aa18.39■□□□□ 0.54
CXCL1-201ENST00000395761 LOXHD1Q8IVV2 1947 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 EFCAB14O75071 495 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 GLRA2P23416 452 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 PBX2P40425 430 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 KCNJ6P48051 423 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 FAM102BQ5T8I3 360 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 ATL3Q6DD88 541 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 ZNF410Q86VK4 478 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 LINC01599Q8WXQ3 324 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 SYMPKQ92797 1274 aaKnown RBP18.39■□□□□ 0.53
CXCL1-201ENST00000395761 CALML4Q96GE6 196 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 RUSC1Q9BVN2 902 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
CXCL1-201ENST00000395761 CCSER1Q9C0I3 900 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 NT5C3AQ9H0P0 336 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 ATP6V1DQ9Y5K8 247 aa18.39■□□□□ 0.53
CXCL1-201ENST00000395761 GPR182O15218 404 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 ASAP2O43150 1006 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 SLC26A4O43511 780 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 PPP6R2O75170 966 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 SMAD3P84022 425 aaKnown RBP18.38■□□□□ 0.53
CXCL1-201ENST00000395761 HERC6Q8IVU3 1022 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 RNF149Q8NC42 400 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 MCPH1Q8NEM0 835 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 SLC9A7Q96T83 725 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms