RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 IL1R1P14778 569 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 ERFP50548 548 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 CLCN2P51788 898 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 ST3GAL1Q11201 340 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 BRD8Q9H0E9 1235 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 VPS33BQ9H267 617 aa12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZNF233A6NK53 670 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 FOXN1O15353 648 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 FGFR1OPO95684 399 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 CD151P48509 253 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 PEX5P50542 639 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 RPS6KA1Q15418 735 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZCWPW2Q504Y3 356 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 MLXIPQ9HAP2 919 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ITM2BQ9Y287 266 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 UBR2Q8IWV8 1755 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 SHANK3Q9BYB0 1731 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 KLRG2A4D1S0 409 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 PSMA7O14818 248 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ACADSP16219 412 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 RXRAP19793 462 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 PHBP35232 272 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 RASA3Q14644 834 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 SFMBT2Q5VUG0 894 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 CROCCP2Q86T23 111 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 TMBIM4Q9HC24 238 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-202ENST00000395358 MYH14Q7Z406 1995 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 WTIPA6NIX2 430 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ABLIM1O14639 778 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 NDUFB5O43674 189 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ORC4O43929 436 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ABL1P00519 1130 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CALM1P0DP23 149 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CALM2P0DP24 149 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CALM3P0DP25 149 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 LMNB1P20700 586 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 MORC3Q14149 939 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 LBRQ14739 615 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 LACTB2Q53H82 288 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 SH3RF3Q8TEJ3 882 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 PCMTD2Q9NV79 361 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 SEC63Q9UGP8 760 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 SATB2Q9UPW6 733 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 NAT1P18440 290 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CALB2P22676 271 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 GNAQP50148 359 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ARPC4P59998 168 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 TFAP4Q01664 338 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 DDX18Q9NVP1 670 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ZNF148Q9UQR1 794 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 KRIT1O00522 736 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 FTCDO95954 541 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ERVK-24P63145 666 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 TBX2Q13207 712 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 ITIH4Q14624 930 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 KRT31Q15323 416 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 DNAJC14Q6Y2X3 702 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 CCT6BQ92526 530 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 RUBCNQ92622 972 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 SYT15Q9BQS2 421 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
RAPGEF3-202ENST00000395358 PDS5AQ29RF7 1337 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 GYPCP04921 128 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM153BP0C7A2 387 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 NFKBIAP25963 317 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 TSPY1Q01534 308 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 SSRP1Q08945 709 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 KPNB1Q14974 876 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 RTN1Q16799 776 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM153CQ494X1 144 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 NCCRP1Q6ZVX7 275 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 OTUD6AQ7L8S5 288 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 FGFR1OP2Q9NVK5 253 aa12.19□□□□□ -0.46
RAPGEF3-202ENST00000395358 FAM153AQ9UHL3 310 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms