RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 RNF135Q8IUD6 432 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 TRIM22Q8IYM9 498 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 SMRP1Q8NCR6 262 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 AIFM3Q96NN9 605 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 SH2D3AQ9BRG2 576 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 UPF3BQ9BZI7 483 aaKnown RBP21.72■■□□□ 1.07
COL11A2-204ENST00000395194 RNF19AQ9NV58 838 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 SEPT9Q9UHD8 586 aaPredicted RBP21.72■■□□□ 1.07
COL11A2-204ENST00000395194 PCDHA4Q9UN74 947 aa21.72■■□□□ 1.07
COL11A2-204ENST00000395194 EYA4O95677 639 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 LAG3P18627 525 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 EIF4BP23588 611 aaKnown RBP21.71■■□□□ 1.07
COL11A2-204ENST00000395194 GPC3P51654 580 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 USP11P51784 963 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 JAK3P52333 1124 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 EVCP57679 992 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 UBE3AQ05086 875 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 TBC1D8BQ0IIM8 1120 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 DRP2Q13474 957 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 MTERF2Q49AM1 385 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 LRRC55Q6ZSA7 311 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 MIER3Q7Z3K6 550 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 VN1R2Q8NFZ6 395 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 NLRP7Q8WX94 980 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 CASD1Q96PB1 797 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 RIT2Q99578 217 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 TMEM117Q9H0C3 514 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 ELAC1Q9H777 363 aaKnown RBP21.71■■□□□ 1.07
COL11A2-204ENST00000395194 SH3GLB2Q9NR46 395 aa21.71■■□□□ 1.07
COL11A2-204ENST00000395194 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
COL11A2-204ENST00000395194 CPLX1O14810 134 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 SFNP31947 248 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 ECHDC2Q86YB7 292 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 ABI1Q8IZP0 508 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 ZSWIM6Q9HCJ5 1215 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 ENTPD7Q9NQZ7 604 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 ARIH1Q9Y4X5 557 aaPredicted RBP21.7■■□□□ 1.06
COL11A2-204ENST00000395194 CYP46A1Q9Y6A2 500 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 PIEZO1Q92508 2521 aa21.7■■□□□ 1.06
COL11A2-204ENST00000395194 DTNBO60941 627 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 PSMD10O75832 226 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 COASYQ13057 564 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 CLLU1OSQ5K130 101 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 BLIDQ8IZY5 108 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 LRRC43Q8N309 656 aa21.69■■□□□ 1.06
COL11A2-204ENST00000395194 FSCN2O14926 492 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 DEXIO95424 95 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 DARSP14868 501 aaKnown RBP21.68■■□□□ 1.06
COL11A2-204ENST00000395194 HOXD11P31277 338 aaPredicted RBP21.68■■□□□ 1.06
COL11A2-204ENST00000395194 DUSP6Q16828 381 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 Q4G0T1 1027 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 LLGL2Q6P1M3 1020 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 KCNT2Q6UVM3 1135 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 HFE2Q6ZVN8 426 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 HELQQ8TDG4 1101 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 MRPS27Q92552 414 aaKnown RBP21.68■■□□□ 1.06
COL11A2-204ENST00000395194 TCF25Q9BQ70 676 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 APOL5Q9BWW9 433 aa21.68■■□□□ 1.06
COL11A2-204ENST00000395194 HIDE1A8MVS5 230 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 HOXA2O43364 376 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 TARBP2Q15633 366 aaKnown RBP21.67■■□□□ 1.06
COL11A2-204ENST00000395194 INF2Q27J81 1249 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 HERC4Q5GLZ8 1057 aaPredicted RBP21.67■■□□□ 1.06
COL11A2-204ENST00000395194 FAM43BQ6ZT52 329 aaPredicted RBP21.67■■□□□ 1.06
COL11A2-204ENST00000395194 RPGRIP1Q96KN7 1286 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 ZNF558Q96NG5 402 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 C22orf23Q9BZE7 217 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 KCNJ14Q9UNX9 436 aa21.67■■□□□ 1.06
COL11A2-204ENST00000395194 ZDBF2Q9HCK1 2354 aa21.66■■□□□ 1.06
COL11A2-204ENST00000395194 NPY5RQ15761 445 aa21.66■■□□□ 1.06
COL11A2-204ENST00000395194 LONRF3Q496Y0 759 aa21.66■■□□□ 1.06
COL11A2-204ENST00000395194 A0A087WZ62 844 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 NT5C1B-RDH14C9J2C7 533 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 M0R2N6 131 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 SLC37A4O43826 429 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 STBD1O95210 358 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 ATF7P17544 494 aaPredicted RBP21.65■■□□□ 1.06
COL11A2-204ENST00000395194 PLCB3Q01970 1234 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 XKR3Q5GH77 459 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 PLA2G4FQ68DD2 849 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 RDM1Q8NG50 284 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 ETNPPLQ8TBG4 499 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 ZNF274Q96GC6 653 aaPredicted RBP21.65■■□□□ 1.06
COL11A2-204ENST00000395194 FDXACB1Q9BRP7 624 aaPredicted RBP21.65■■□□□ 1.06
COL11A2-204ENST00000395194 DDX25Q9UHL0 483 aaKnown RBP21.65■■□□□ 1.06
COL11A2-204ENST00000395194 PUF60Q9UHX1 559 aaKnown RBP21.65■■□□□ 1.06
COL11A2-204ENST00000395194 LZTS1Q9Y250 596 aa21.65■■□□□ 1.06
COL11A2-204ENST00000395194 CYP3A7-CYP3A51PA0A087WV96 503 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 DDX11L8A8MPP1 907 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 LOC730098B7Z3J9 87 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 SP100P23497 879 aaPredicted RBP21.64■■□□□ 1.05
COL11A2-204ENST00000395194 CYP3A7P24462 503 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 CA8P35219 290 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 TECP42680 631 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 NONOQ15233 471 aaKnown RBP eCLIP21.64■■□□□ 1.05
COL11A2-204ENST00000395194 LETM2Q2VYF4 491 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 B3GNT9Q6UX72 402 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 TMC7Q7Z402 723 aa21.64■■□□□ 1.05
COL11A2-204ENST00000395194 ZNF598Q86UK7 904 aaKnown RBP21.64■■□□□ 1.05
COL11A2-204ENST00000395194 RHPN2Q8IUC4 686 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms