RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 CCND3P30281 292 aaPredicted RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 NMT1P30419 496 aaKnown RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 TBX2Q13207 712 aaPredicted RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 TTLL4Q14679 1199 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 CCDC150Q8NCX0 1101 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 SCFD2Q8WU76 684 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 EEF2KMTQ96G04 330 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 DRC1Q96MC2 740 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 SH2D3AQ9BRG2 576 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 TUBGCP2Q9BSJ2 902 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 RBM47A0AV96 593 aaKnown RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 PDXKO00764 312 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 MAP3K21Q5TCX8 1036 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 MAEAQ7L5Y9 396 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 TRMT1LQ7Z2T5 733 aaKnown RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 AFAP1L1Q8TED9 768 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 COPS5Q92905 334 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 PCYT2Q99447 389 aa27.05■■□□□ 1.92
CTF1-202ENST00000395019 SEPT9Q9UHD8 586 aaPredicted RBP27.05■■□□□ 1.92
CTF1-202ENST00000395019 LGALS16A8MUM7 142 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 PLS3P13797 630 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 ATP4AP20648 1035 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 ARID5BQ14865 1188 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 PTPN21Q16825 1174 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 STRA6Q9BX79 667 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 PRDM10Q9NQV6 1147 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 TYW1Q9NV66 732 aaKnown RBP27.04■■□□□ 1.92
CTF1-202ENST00000395019 PCDHB13Q9Y5F0 798 aa27.04■■□□□ 1.92
CTF1-202ENST00000395019 CALUO43852 315 aaPredicted RBP27.03■■□□□ 1.92
CTF1-202ENST00000395019 OATP04181 439 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 TPM2P07951 284 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 TXNP10599 105 aaKnown RBP27.03■■□□□ 1.92
CTF1-202ENST00000395019 MTIF2P46199 727 aaKnown RBP27.03■■□□□ 1.92
CTF1-202ENST00000395019 FAM160B1Q5W0V3 765 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 GPR20Q99678 358 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 PDLIM7Q9NR12 457 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 CYP26B1Q9NR63 512 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 ITIH6Q6UXX5 1313 aa27.03■■□□□ 1.92
CTF1-202ENST00000395019 PPP1R37O75864 691 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 DGAT1O75907 488 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 SMPD1P17405 629 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 LRMPQ12912 555 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 ALCAMQ13740 583 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 ARMCX5Q6P1M9 558 aa27.02■■□□□ 1.92
CTF1-202ENST00000395019 DHX37Q8IY37 1157 aaKnown RBP27.02■■□□□ 1.92
CTF1-202ENST00000395019 GNA14O95837 355 aa27.01■■□□□ 1.92
CTF1-202ENST00000395019 PRKCSHP14314 528 aaPredicted RBP27.01■■□□□ 1.92
CTF1-202ENST00000395019 TCF7P36402 384 aaPredicted RBP27.01■■□□□ 1.92
CTF1-202ENST00000395019 STAT5BP51692 787 aa27.01■■□□□ 1.92
CTF1-202ENST00000395019 FBXO46Q6PJ61 603 aaPredicted RBP27.01■■□□□ 1.92
CTF1-202ENST00000395019 NIFKQ9BYG3 293 aaKnown RBP27.01■■□□□ 1.92
CTF1-202ENST00000395019 MYH11P35749 1972 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 MYH9P35579 1960 aaKnown RBP27.01■■□□□ 1.91
CTF1-202ENST00000395019 ARID2Q68CP9 1835 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 LGR5O75473 907 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 SFPQP23246 707 aaKnown RBP eCLIP27.01■■□□□ 1.91
CTF1-202ENST00000395019 SLC9C1Q4G0N8 1177 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 ZC2HC1CQ53FD0 456 aaPredicted RBP27.01■■□□□ 1.91
CTF1-202ENST00000395019 SLC17A8Q8NDX2 589 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 MCPH1Q8NEM0 835 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 ST6GALNAC4Q9H4F1 302 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 GPRC5CQ9NQ84 441 aa27.01■■□□□ 1.91
CTF1-202ENST00000395019 CETN3O15182 167 aa27■■□□□ 1.91
CTF1-202ENST00000395019 MYCP01106 439 aaPredicted RBP27■■□□□ 1.91
CTF1-202ENST00000395019 CNGA1P29973 690 aa27■■□□□ 1.91
CTF1-202ENST00000395019 DNM2P50570 870 aa27■■□□□ 1.91
CTF1-202ENST00000395019 UBXN1Q04323 297 aa27■■□□□ 1.91
CTF1-202ENST00000395019 KCNA1Q09470 495 aa27■■□□□ 1.91
CTF1-202ENST00000395019 ADAM9Q13443 819 aa27■■□□□ 1.91
CTF1-202ENST00000395019 HSDL1Q3SXM5 330 aa27■■□□□ 1.91
CTF1-202ENST00000395019 FAM102BQ5T8I3 360 aa27■■□□□ 1.91
CTF1-202ENST00000395019 KIFAP3Q92845 792 aa27■■□□□ 1.91
CTF1-202ENST00000395019 SPATA33Q96N06 139 aa27■■□□□ 1.91
CTF1-202ENST00000395019 NOC4LQ9BVI4 516 aaKnown RBP27■■□□□ 1.91
CTF1-202ENST00000395019 C17orf75Q9HAS0 396 aa27■■□□□ 1.91
CTF1-202ENST00000395019 ZMYM2Q9UBW7 1377 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 A0A1W2PQC6 194 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 NOP56O00567 594 aaKnown RBP26.99■■□□□ 1.91
CTF1-202ENST00000395019 MARSP56192 900 aaKnown RBP26.99■■□□□ 1.91
CTF1-202ENST00000395019 IRX5P78411 483 aaPredicted RBP26.99■■□□□ 1.91
CTF1-202ENST00000395019 NFIL3Q16649 462 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 MAN2A1Q16706 1144 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 MIIPQ5JXC2 388 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 ATP6V0A4Q9HBG4 840 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 NRBP2Q9NSY0 501 aa26.99■■□□□ 1.91
CTF1-202ENST00000395019 K7ENM7 598 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 TGFB1I1O43294 461 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 NR2F2P24468 414 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 TNFAIP2Q03169 654 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 MTFR1Q15390 333 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 MTERF2Q49AM1 385 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 AZI2Q9H6S1 392 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 RRAGDQ9NQL2 400 aaPredicted RBP26.98■■□□□ 1.91
CTF1-202ENST00000395019 XPNPEP1Q9NQW7 623 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 PYCARDQ9ULZ3 195 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 RPL13P26373 211 aaKnown RBP26.98■■□□□ 1.91
CTF1-202ENST00000395019 NCKAP1LP55160 1127 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 RTP1P59025 263 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 DUSP28Q4G0W2 176 aa26.98■■□□□ 1.91
CTF1-202ENST00000395019 IQSEC1Q6DN90 963 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms