RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 GNA14O95837 355 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 NR3C1P04150 777 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 NF2P35240 595 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 NCKAP1LP55160 1127 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 RTKN2Q8IZC4 609 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 RNF10Q8N5U6 811 aaKnown RBP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 BCAS4Q8TDM0 211 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ADAM9Q13443 819 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 PHLDB3Q6NSJ2 640 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 NR2F2P24468 414 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 MAGEA9P43362 315 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 C2orf54Q08AI8 447 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 CASP8Q14790 479 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 TRADDQ15628 312 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 ZNF568Q3ZCX4 644 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SPATA4Q8NEY3 305 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
HIF1A-203ENST00000394997 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 AGPAT3Q9NRZ7 376 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 GOLGA6AQ9NYA3 693 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 KCND2Q9NZV8 630 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 DBR1Q9UK59 544 aaKnown RBP11.22□□□□□ -0.61
HIF1A-203ENST00000394997 FEM1BQ9UK73 627 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 CYP4A11Q02928 519 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 EMC10Q5UCC4 262 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 CCDC65Q8IXS2 484 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SECISBP2LQ93073 1101 aaKnown RBP11.22□□□□□ -0.61
HIF1A-203ENST00000394997 LRRC1Q9BTT6 524 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 IFIH1Q9BYX4 1025 aaKnown RBP11.22□□□□□ -0.61
HIF1A-203ENST00000394997 TXLNGYQ9BZA5 131 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 COG5Q9UP83 839 aa11.22□□□□□ -0.61
HIF1A-203ENST00000394997 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 F8VZ95 297 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 DDX3YO15523 660 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 SHOX2O60902 331 aaPredicted RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 RNF40O75150 1001 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 EDN1P05305 212 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 WNT7BP56706 349 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 PGM5Q15124 567 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 RUBCNQ92622 972 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 MS4A14Q96JA4 679 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 RIT2Q99578 217 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 RPS6KA5O75582 802 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 MAPTP10636 758 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 CLDN10P78369 228 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 GTF2BQ00403 316 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 MIGA2Q7L4E1 593 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 GSPT2Q8IYD1 628 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 C12orf42Q96LP6 360 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 RBM12Q9NTZ6 932 aaKnown RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
HIF1A-203ENST00000394997 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.61
HIF1A-203ENST00000394997 TMEM150BA6NC51 233 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.62
HIF1A-203ENST00000394997 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 FAM212AQ96EL1 285 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 HES6Q96HZ4 224 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 FBXL18Q96ME1 805 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 JPH2Q9BR39 696 aaPredicted RBP11.21□□□□□ -0.62
HIF1A-203ENST00000394997 ZHX2Q9Y6X8 837 aa11.21□□□□□ -0.62
HIF1A-203ENST00000394997 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 H0YGN5 161 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 CHRNB2P17787 502 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 RARRES1P49788 294 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 POLR2FP61218 127 aaKnown RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 KIF22Q14807 665 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 BSNDQ8WZ55 320 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 TRAF5O00463 557 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 GLI1P08151 1106 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms