RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RNPEPL1Q9HAU8 725 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 EPHB6O15197 1021 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 AGTP01019 485 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 GSTA2P09210 222 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 CALB2P22676 271 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 PARP6Q2NL67 630 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 ANKRD40Q6AI12 368 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 PRR5LQ6MZQ0 368 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 FAM196AQ6ZSG2 479 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 SLC51AQ86UW1 340 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 COL23A1Q86Y22 540 aaPredicted RBP20.42■□□□□ 0.86
HOXC6-202ENST00000394331 VCXQ9H320 206 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 ADRA2BP18089 450 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 NOVP48745 357 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 PDE4DQ08499 809 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 RRAGAQ7L523 313 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 CEP95Q96GE4 821 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 A8MUI8 341 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 PGRMC1O00264 195 aaKnown RBP20.41■□□□□ 0.86
HOXC6-202ENST00000394331 USP11P51784 963 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 EHHADHQ08426 723 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 DDX42Q86XP3 938 aaKnown RBP eCLIP20.41■□□□□ 0.86
HOXC6-202ENST00000394331 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 CALML4Q96GE6 196 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 SYT15Q9BQS2 421 aa20.41■□□□□ 0.86
HOXC6-202ENST00000394331 RHBDL3P58872 404 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 ASIC1P78348 528 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 CCDC15Q0P6D6 951 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 RPS6KA1Q15418 735 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 SLC9C1Q4G0N8 1177 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 REXO1Q8N1G1 1221 aaKnown RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 ENDOVQ8N8Q3 282 aaKnown RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 TMEM109Q9BVC6 243 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 NHSQ6T4R5 1651 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 SERPING1P05155 500 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 PYGBP11216 843 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 SP100P23497 879 aaPredicted RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 MAN2A1Q16706 1144 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 MFSD14BQ5SR56 506 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 LRRC15Q8TF66 581 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 RBM17Q96I25 401 aaKnown RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 MMTAG2Q9BU76 263 aaKnown RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 STMN4Q9H169 189 aaPredicted RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 RXRBP28702 533 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 PDE6BP35913 854 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 IRGCQ6NXR0 463 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 KIFAP3Q92845 792 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 PIGSQ96S52 555 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 RIOX1Q9H6W3 641 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 VAT1LQ9HCJ6 419 aa20.4■□□□□ 0.86
HOXC6-202ENST00000394331 FAM207AQ9NSI2 230 aaPredicted RBP20.4■□□□□ 0.86
HOXC6-202ENST00000394331 GAKO14976 1311 aa20.39■□□□□ 0.86
HOXC6-202ENST00000394331 BBOX1O75936 387 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 TECP42680 631 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 PSMC4P43686 418 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 PRMT1Q99873 361 aaKnown RBP20.39■□□□□ 0.85
HOXC6-202ENST00000394331 SELENOSQ9BQE4 189 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 DAPK3O43293 454 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 ZBTB48P10074 688 aaPredicted RBP20.39■□□□□ 0.85
HOXC6-202ENST00000394331 KLRC1P26715 233 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 PCK1P35558 622 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 TUBP50607 506 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 TSNAXIP1Q2TAA8 658 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 TNFAIP8L3Q5GJ75 292 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 ARL2BPQ9Y2Y0 163 aa20.39■□□□□ 0.85
HOXC6-202ENST00000394331 RANBP1P43487 201 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 HHATQ5VTY9 493 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 RASGEF1CQ8N431 466 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 STK32AQ8WU08 396 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 PIDD1Q9HB75 910 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 RPL26L1Q9UNX3 145 aaKnown RBP20.38■□□□□ 0.85
HOXC6-202ENST00000394331 PPARDQ03181 441 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 SLC18A3Q16572 532 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 TRIM68Q6AZZ1 485 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 OR52E8Q6IFG1 317 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 BTNL9Q6UXG8 535 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 CYP39A1Q9NYL5 469 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 CNOT7Q9UIV1 285 aaKnown RBP20.38■□□□□ 0.85
HOXC6-202ENST00000394331 ATP8B3O60423 1300 aa20.38■□□□□ 0.85
HOXC6-202ENST00000394331 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
HOXC6-202ENST00000394331 KCNK3O14649 394 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 ZSCAN9O15535 394 aaPredicted RBP20.37■□□□□ 0.85
HOXC6-202ENST00000394331 PEX5P50542 639 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 STK4Q13043 487 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 MTA1Q13330 715 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 C6orf118Q5T5N4 469 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 FMO2Q99518 471 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 EPB41L4BQ9H329 900 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 PABPC3Q9H361 631 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms