RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ADCK5Q3MIX3 580 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 ECHDC2Q86YB7 292 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 SLC39A11Q8N1S5 342 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 LENG9Q96B70 501 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 SNX27Q96L92 541 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 TBC1D22BQ9NU19 505 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 HCFC2Q9Y5Z7 792 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 PSAPP07602 524 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 NLRP11P59045 1033 aaKnown RBP17.41■□□□□ 0.38
CHMP3-202ENST00000393773 DHX32Q7L7V1 743 aaKnown RBP17.41■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
CHMP3-202ENST00000393773 LRRC71Q8N4P6 559 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 CASP10Q92851 521 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 FAM167AQ96KS9 214 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 MAP7D2Q96T17 732 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 POMKQ9H5K3 350 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 SPG21Q9NZD8 308 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 GABBR1Q9UBS5 961 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 PUF60Q9UHX1 559 aaKnown RBP17.41■□□□□ 0.38
CHMP3-202ENST00000393773 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 PCDHA10Q9Y5I2 948 aa17.41■□□□□ 0.38
CHMP3-202ENST00000393773 C2orf71A6NGG8 1288 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 C2CD4DB7Z1M9 353 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 MAGEB2O15479 319 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF862O60290 1169 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 GFRA3O60609 400 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 EIF4BP23588 611 aaKnown RBP17.4■□□□□ 0.38
CHMP3-202ENST00000393773 GPC3P51654 580 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
CHMP3-202ENST00000393773 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 EFCAB12Q6NXP0 572 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 TRMT1LQ7Z2T5 733 aaKnown RBP17.4■□□□□ 0.38
CHMP3-202ENST00000393773 TMC7Q7Z402 723 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 ZBTB33Q86T24 672 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
CHMP3-202ENST00000393773 KREMEN2Q8NCW0 462 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 RIPOR3Q96MK2 946 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 NR2E1Q9Y466 385 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 DCHS1Q96JQ0 3298 aa17.4■□□□□ 0.38
CHMP3-202ENST00000393773 BRD1O95696 1058 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 OATP04181 439 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 DARSP14868 501 aaKnown RBP17.39■□□□□ 0.37
CHMP3-202ENST00000393773 CIITAP33076 1130 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-202ENST00000393773 PRKCEQ02156 737 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 MTMR3Q13615 1198 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 UGCGQ16739 394 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 TSGA10IPQ3SY00 556 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 PRR16Q569H4 304 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 ZNF668Q96K58 619 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-202ENST00000393773 ADAM7Q9H2U9 754 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
CHMP3-202ENST00000393773 FAM186AA6NE01 2351 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 A0A0U1RQF3 1178 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 CLASP2O75122 1294 aaKnown RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 FGFR4P22455 802 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 NUBP1P53384 320 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 KRT17Q04695 432 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 ITIH3Q06033 890 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 ZNF710Q8N1W2 664 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 MRPL43Q8N983 215 aaKnown RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 NECTIN4Q96NY8 510 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 MRPL9Q9BYD2 267 aaKnown RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 SMOC2Q9H3U7 446 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 TCEAL9Q9UHQ7 104 aa17.38■□□□□ 0.37
CHMP3-202ENST00000393773 RIF1Q5UIP0 2472 aaKnown RBP17.38■□□□□ 0.37
CHMP3-202ENST00000393773 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
CHMP3-202ENST00000393773 EDIL3O43854 480 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 TMOD1P28289 359 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 METAP2P50579 478 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHMP3-202ENST00000393773 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 UBALD2Q8IYN6 164 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 ATOH1Q92858 354 aaPredicted RBP17.37■□□□□ 0.37
CHMP3-202ENST00000393773 ZBP1Q9H171 429 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 IRF2BPLQ9H1B7 796 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 C6orf50Q9HD87 102 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 ZNF292O60281 2723 aa17.37■□□□□ 0.37
CHMP3-202ENST00000393773 PROB1E7EW31 1015 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 H0Y858 1186 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 EOMESO95936 686 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 BCAR1P56945 870 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 DRP2Q13474 957 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 KIAA1841Q6NSI8 718 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 CES5AQ6NT32 575 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 TMEM105Q8N8V8 129 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms