RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 IFT74Q96LB3 600 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 BAG1Q99933 345 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 POLR3FQ9H1D9 316 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 TMEM206Q9H813 350 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 ARMCX3Q9UH62 379 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
TDP1-203ENST00000393454 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 KIF3CO14782 793 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 SNAI1O95863 264 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 GH1P01241 217 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TRIM21P19474 475 aaKnown RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 NPTX2P47972 431 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 KLK7P49862 253 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 FXR1P51114 621 aaKnown RBP eCLIP9.49□□□□□ -0.89
TDP1-203ENST00000393454 NCKAP1LP55160 1127 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 GJC2Q5T442 439 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 FRMD5Q7Z6J6 570 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 NPLOC4Q8TAT6 608 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 GOLGA5Q8TBA6 731 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 AFAP1L1Q8TED9 768 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 SLC7A3Q8WY07 619 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TMEM143Q96AN5 459 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TINF2Q9BSI4 451 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 KIFC3Q9BVG8 833 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 STRA6Q9BX79 667 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 XPNPEP1Q9NQW7 623 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 ADGRA2Q96PE1 1338 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 TLR2O60603 784 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 MFAP3LO75121 409 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 PPP1R37O75864 691 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 AKAP3O75969 853 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 CASP4P49662 377 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 GTF2BQ00403 316 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 DNTTIP2Q5QJE6 756 aaKnown RBP9.48□□□□□ -0.89
TDP1-203ENST00000393454 TCERG1LQ5VWI1 586 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 C17orf99Q6UX52 265 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 MAMDC4Q6UXC1 1216 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 BSNDQ8WZ55 320 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 NUP58Q9BVL2 599 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 SMARCAD1Q9H4L7 1026 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 C17orf75Q9HAS0 396 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 PDLIM7Q9NR12 457 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 FRMD4BQ9Y2L6 1034 aa9.48□□□□□ -0.89
TDP1-203ENST00000393454 DENND3A2RUS2 1198 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 SLC16A3O15427 465 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 EXOC3O60645 756 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 LGR5O75473 907 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 KRT9P35527 623 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 PSMC2P35998 433 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 RFC5P40937 340 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 ARHGAP1Q07960 439 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 CRHR2Q13324 411 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 ACVR2BQ13705 512 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TSR1Q2NL82 804 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 DCAF17Q5H9S7 520 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 PLPPR4Q7Z2D5 763 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 ERGIC2Q96RQ1 377 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 ABHD16BQ9H3Z7 469 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 ST6GALNAC4Q9H4F1 302 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 PCIF1Q9H4Z3 704 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 METTL14Q9HCE5 456 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 TRMT1Q9NXH9 659 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 FAM184BQ9ULE4 1060 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 TBX20Q9UMR3 447 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 LUC7L2Q9Y383 392 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 DOCK3Q8IZD9 2030 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 RBM47A0AV96 593 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 TTC26A0AVF1 554 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 RNF225M0QZC1 329 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 STX10O60499 249 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 CYP2B6P20813 491 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 PLCB4Q15147 1175 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 NFIL3Q16649 462 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms