RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 EMC2Q15006 297 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 ECM1Q16610 540 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 MAEAQ7L5Y9 396 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 CATSPER3Q86XQ3 398 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 RHPN2Q8IUC4 686 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 ARNTL2Q8WYA1 636 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 TOP1MTQ969P6 601 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 NLRP4Q96MN2 994 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 RAD9AQ99638 391 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 FDXACB1Q9BRP7 624 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 XPNPEP1Q9NQW7 623 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 SUCLA2Q9P2R7 463 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 LINC01553A4QN01 128 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 USO1O60763 962 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 DKC1O60832 514 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 SYT1P21579 422 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 EIF4BP23588 611 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 CCT6AP40227 531 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 RARRES1P49788 294 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 ORC2Q13416 577 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 ZRSR1Q15695 479 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 PAN2Q504Q3 1202 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 RILPL1Q5EBL4 403 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 HSCBQ8IWL3 235 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 NEK9Q8TD19 979 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 PRPF31Q8WWY3 499 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 SLC7A3Q8WY07 619 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 SNX21Q969T3 373 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 CCDC43Q96MW1 224 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 YME1L1Q96TA2 773 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 ADAM2Q99965 735 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 C17orf80Q9BSJ5 609 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 DHX33Q9H6R0 707 aaKnown RBP8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 POLD4Q9HCU8 107 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 GPRC5CQ9NQ84 441 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 LRWD1Q9UFC0 647 aa8.56□□□□□ -1.04
HMGB3P1-201ENST00000393368 DENND3A2RUS2 1198 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 LYPLA2O95372 231 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 SRGAP2CP0DJJ0 459 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 DARSP14868 501 aaKnown RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 IGFBP4P22692 258 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 RFC5P40937 340 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 DNM2P50570 870 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 HTRA4P83105 476 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 ATP2C1P98194 919 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 GRIN1Q05586 938 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 LAMTOR4Q0VGL1 99 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 RESTQ13127 1097 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 DTHD1Q6ZMT9 781 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 OTUD6AQ7L8S5 288 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 IGSF22Q8N9C0 903 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 USP38Q8NB14 1042 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 ERMNQ8TAM6 284 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 SNX29Q8TEQ0 813 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 GDPD5Q8WTR4 605 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 PPM1EQ8WY54 764 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 PLIN2Q99541 437 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 MTRQ99707 1265 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 FTHL17Q9BXU8 183 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 MINDY3Q9H8M7 445 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 RC3H2Q9HBD1 1191 aaKnown RBP8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 ATP6V0A4Q9HBG4 840 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 TUFT1Q9NNX1 390 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 ANKEF1Q9NU02 776 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 HCSTQ9UBK5 93 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 MTMR6Q9Y217 621 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 COL4A3BPQ9Y5P4 624 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 COL4A6Q14031 1691 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 REV3LO60673 3130 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 XIRP2A4UGR9 3374 aa8.55□□□□□ -1.04
HMGB3P1-201ENST00000393368 MICAL3Q7RTP6 2002 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 E9PMD0 336 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 GPR182O15218 404 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 CSPG5O95196 566 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 FGFR1P11362 822 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 RPA1P27694 616 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 CEBPZQ03701 1054 aaKnown RBP8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 DSC3Q14574 896 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 SF3A1Q15459 793 aaKnown RBP8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 FAM102BQ5T8I3 360 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 HAUS3Q68CZ6 603 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 KCNK18Q7Z418 384 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 BRAPQ7Z569 592 aa8.54□□□□□ -1.04
HMGB3P1-201ENST00000393368 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms