RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TBC1D8BQ0IIM8 1120 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 MCM6Q14566 821 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 PLA2G4FQ68DD2 849 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 GPT2Q8TD30 523 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 TMEM134Q9H6X4 195 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 SERTAD1Q9UHV2 236 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 ZMYM2Q9UBW7 1377 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 TREHO43280 583 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 CXCL10P02778 98 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 NAMPTP43490 491 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 NPEPPSP55786 919 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 RUFY4Q6ZNE9 571 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 CEP57L1Q8IYX8 460 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 CCDC34Q96HJ3 373 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 SENP6Q9GZR1 1112 aaPredicted RBP14.73□□□□□ -0.05
USP44-202ENST00000393091 CCDC113Q9H0I3 377 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 NR1I2O75469 434 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 PPP1R37O75864 691 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 TMOD1P28289 359 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 ALCAMQ13740 583 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 SKOR2Q2VWA4 1001 aaPredicted RBP14.72□□□□□ -0.05
USP44-202ENST00000393091 UNC13DQ70J99 1090 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 NOC4LQ9BVI4 516 aaKnown RBP14.72□□□□□ -0.05
USP44-202ENST00000393091 CLSTN2Q9H4D0 955 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 PLS3P13797 630 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 PPP2R5AQ15172 486 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 EFCAB12Q6NXP0 572 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 CKAP2LQ8IYA6 745 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 PTPRSQ13332 1948 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 MICAL3Q7RTP6 2002 aa14.72□□□□□ -0.05
USP44-202ENST00000393091 H0YCG3 227 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 MARK3P27448 753 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 DNM2P50570 870 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 POLGP54098 1239 aaPredicted RBP14.71□□□□□ -0.05
USP44-202ENST00000393091 BFSP2Q13515 415 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 BMT2Q1RMZ1 405 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 MTERF2Q49AM1 385 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 EPM2AIP1Q7L775 607 aaPredicted RBP14.71□□□□□ -0.05
USP44-202ENST00000393091 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 HTATIP2Q9BUP3 242 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 TRAIPQ9BWF2 469 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 RHOBTB3O94955 611 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 PIGRP01833 764 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 CRYBB1P53674 252 aaPredicted RBP14.71□□□□□ -0.05
USP44-202ENST00000393091 MRPS6P82932 125 aaKnown RBP14.71□□□□□ -0.05
USP44-202ENST00000393091 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 RSPH3Q86UC2 560 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 GPBP1Q86WP2 473 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 DDX12PQ92771 950 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 DHX58Q96C10 678 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 GSDMAQ96QA5 445 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 REEP2Q9BRK0 252 aa14.71□□□□□ -0.05
USP44-202ENST00000393091 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
USP44-202ENST00000393091 CLTBP09497 229 aa14.71□□□□□ -0.06
USP44-202ENST00000393091 GPC3P51654 580 aa14.71□□□□□ -0.06
USP44-202ENST00000393091 TRIM60Q495X7 471 aa14.71□□□□□ -0.06
USP44-202ENST00000393091 TMEM150BA6NC51 233 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 CYP2C9P11712 490 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 GLRA2P23416 452 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 CT47A1Q5JQC4 288 aaPredicted RBP14.7□□□□□ -0.06
USP44-202ENST00000393091 TRIML1Q8N9V2 468 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 C2orf40Q9H1Z8 148 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 COL4A3BPQ9Y5P4 624 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 EIF3DO15371 548 aaKnown RBP eCLIP14.7□□□□□ -0.06
USP44-202ENST00000393091 HIP1RO75146 1068 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 SNRPFP62306 86 aaKnown RBP14.7□□□□□ -0.06
USP44-202ENST00000393091 PSPC1Q8WXF1 523 aaKnown RBP14.7□□□□□ -0.06
USP44-202ENST00000393091 WNT8BQ93098 351 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 IFT122Q9HBG6 1241 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 TRPV2Q9Y5S1 764 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 SCN5AQ14524 2016 aa14.7□□□□□ -0.06
USP44-202ENST00000393091 CKBP12277 381 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 PTENP60484 403 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 GTF2BQ00403 316 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 LAMTOR4Q0VGL1 99 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 TFDP1Q14186 410 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 POSTNQ15063 836 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 TRMT13Q9NUP7 481 aaKnown RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 SUCLA2Q9P2R7 463 aaPredicted RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 TIMP1P01033 207 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 PFKMP08237 780 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 EFNA5P52803 228 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 NFIL3Q16649 462 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 CNNM3Q8NE01 707 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 TRAPPC12Q8WVT3 735 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 CELF4Q9BZC1 486 aaKnown RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 ZNF200P98182 395 aaPredicted RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 TLE2Q04725 743 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 ODR4Q5SWX8 454 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 ASAP3Q8TDY4 903 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 PRIMPOLQ96LW4 560 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 TRPV6Q9H1D0 765 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 POLR3FQ9H1D9 316 aaPredicted RBP14.69□□□□□ -0.06
USP44-202ENST00000393091 FZD8Q9H461 694 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms