RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ENTPD5O75356 428 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZWINTO95229 277 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 AGTP01019 485 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GFAPP14136 432 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 KRT15P19012 456 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 EIF4A3P38919 411 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 TUBA1BP68363 451 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 TUBA1AQ71U36 451 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SAMD3Q8N6K7 520 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 CFAP57Q96MR6 1250 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 KLHL25Q9H0H3 589 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 NAPBQ9H115 298 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ISCUQ9H1K1 167 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GID8Q9NWU2 228 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 PPP1R1BQ9UD71 204 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SLC12A7Q9Y666 1083 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZBTB43O43298 467 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 BMP15O95972 392 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 CLPTM1O96005 669 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 HSPA8P11142 646 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RXRAP19793 462 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 FLT3P36888 993 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RAPGEF1Q13905 1077 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RESP18Q5W5W9 173 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 CALML6Q8TD86 181 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 EEF2KMTQ96G04 330 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 FERMT1Q9BQL6 677 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 TIPINQ9BVW5 301 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 C10orf88Q9H8K7 445 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 OLFML3Q9NRN5 406 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 AFF2P51816 1311 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 GOLGA8TH3BQL2 631 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SPTLC1O15269 473 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SNX3O60493 162 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SHBGP04278 402 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 GOLGA8HP0CJ92 632 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ITGA6P23229 1130 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ASPHQ12797 758 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TCP11X2Q5H9J9 407 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SHC4Q6S5L8 630 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ADAT2Q7Z6V5 191 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 MB21D1Q8N884 522 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 NAT14Q8WUY8 206 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TUBGCP5Q96RT8 1024 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 RBMX2Q9Y388 322 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 IQSEC2Q5JU85 1478 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 GRID2IPA4D2P6 1211 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SLC26A4O43511 780 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC22O60826 627 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 FAM163BP0C2L3 166 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 UBA7P41226 1012 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 NAA20P61599 178 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 C1orf146Q5VVC0 180 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC84Q86UT8 332 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SYT2Q8N9I0 419 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 PDZD8Q8NEN9 1154 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 DEPTORQ8TB45 409 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 MKL1Q969V6 931 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 DNAJC1Q96KC8 554 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TSG101Q99816 390 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 NUF2Q9BZD4 464 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ASCC2Q9H1I8 757 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TACC3Q9Y6A5 838 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CEP170BQ9Y4F5 1589 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CFAP69A5D8W1 941 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC188H7C350 402 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 GNPATO15228 680 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 HAUS5O94927 633 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ESRRBO95718 433 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 KRT10P13645 584 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 BRAFP15056 766 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 EPHB2P29323 1055 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 HDAC4P56524 1084 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TCIRG1Q13488 830 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 KRT81Q14533 505 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ANKRD35Q8N283 1001 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 PIGBQ92521 554 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CRNKL1Q9BZJ0 848 aaKnown RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-201ENST00000393077 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
VTI1A-201ENST00000393077 CRB1P82279 1406 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 C5orf60A6NFR6 353 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 BOLA2-SMG1P6H3BVE0 249 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms