RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 CHMP6Q96FZ7 201 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 GH2P01242 217 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 SRGAP2CP0DJJ0 459 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 ZNF18P17022 549 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 KCNB1Q14721 858 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 PPP6R3Q5H9R7 873 aaPredicted RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 ZC3H18Q86VM9 953 aaKnown RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 SIX6OS1Q8N1H7 587 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 MCPH1Q8NEM0 835 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 DCAF4Q8WV16 495 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 DACT3Q96B18 629 aaPredicted RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 C11orf70Q9BRQ4 267 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 CTIFO43310 598 aaKnown RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 HSPA4LO95757 839 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 CCNA1P78396 465 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
LCA5-202ENST00000392959 ZNF564Q8TBZ8 553 aaPredicted RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 TSC22D3Q99576 134 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 FBXO2Q9UK22 296 aaPredicted RBP14.04□□□□□ -0.16
LCA5-202ENST00000392959 ORC6Q9Y5N6 252 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 FTLP02792 175 aaPredicted RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 EEF1B2P24534 225 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 ACTN3Q08043 901 aaPredicted RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 NAALADL2Q58DX5 795 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 DPP9Q86TI2 863 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 TRIM59Q8IWR1 403 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 HSPH1Q92598 858 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 VPS39Q96JC1 886 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 FGD4Q96M96 766 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 SRP68Q9UHB9 627 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 FBXL5Q9UKA1 691 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 TTC7AQ9ULT0 858 aaPredicted RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 MINPP1Q9UNW1 487 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 PRELPP51888 382 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 SLC12A1Q13621 1099 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 EEPD1Q7L9B9 569 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 RSPH3Q86UC2 560 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 TRIML2Q8N7C3 387 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 ZFP69BQ9UJL9 534 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 SNX12Q9UMY4 172 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 APOBEC2Q9Y235 224 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 CDHR2Q9BYE9 1310 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 HAUS5O94927 633 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 OCRLQ01968 901 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 PPP1R18Q6NYC8 613 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 ARMCX2Q7L311 632 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 NCAPGQ9BPX3 1015 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 ETNK1Q9HBU6 452 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 JAK3P52333 1124 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 PDXDC1Q6P996 788 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 GLYCTKQ8IVS8 523 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 RFFLQ8WZ73 363 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 DCPSQ96C86 337 aaKnown RBP14.03□□□□□ -0.16
LCA5-202ENST00000392959 CHP1Q99653 195 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 CENPKQ9BS16 269 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 SEL1LQ9UBV2 794 aa14.03□□□□□ -0.16
LCA5-202ENST00000392959 PPP1R37O75864 691 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 HSPA8P11142 646 aaKnown RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 FCER1AP12319 257 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 BIRC2Q13490 618 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 MIGA2Q7L4E1 593 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 GPR101Q96P66 508 aaPredicted RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 CPSF3Q9UKF6 684 aaKnown RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 POTEFA5A3E0 1075 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 POTEIP0CG38 1075 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 DEUP1Q05D60 604 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 TSTA3Q13630 321 aaPredicted RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.16
LCA5-202ENST00000392959 POTEGQ6S5H5 508 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 TMEM270Q6UE05 265 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 METTL23Q86XA0 190 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 STAG2Q8N3U4 1231 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 NLRP4Q96MN2 994 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 LRRC1Q9BTT6 524 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 NUP85Q9BW27 656 aa14.02□□□□□ -0.16
LCA5-202ENST00000392959 RAD17O75943 681 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 KRT10P13645 584 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 KRT39Q6A163 491 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.17
LCA5-202ENST00000392959 TRIM67Q6ZTA4 783 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 SAAL1Q96ER3 474 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms