RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PSAPP07602 524 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 ICAM3P32942 547 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 KIF5AQ12840 1032 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 ELF2Q15723 593 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 XKR9Q5GH70 373 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 DPY19L2P1Q6NXN4 242 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 SYCP3Q8IZU3 236 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 ACCSQ96QU6 501 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 SLC9A2Q9UBY0 812 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 AKR1B10O60218 316 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 EIF3JO75822 258 aaKnown RBP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 PON1P27169 355 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 GTF2BQ00403 316 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 STXBP2Q15833 593 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 TCERG1LQ5VWI1 586 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 ARMC9Q7Z3E5 817 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 LRRN4CLQ8ND94 238 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 UBXN4Q92575 508 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 IFIH1Q9BYX4 1025 aaKnown RBP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 TRIM10Q9UDY6 481 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 V9GYY5 206 aaPredicted RBP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 SPDYE5A6NIY4 337 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 RBAK-RBAKDNI3L0D1 243 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 HSP90AA2PQ14568 343 aaPredicted RBP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 KLHDC7AQ5VTJ3 777 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 ANO5Q75V66 913 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 KSR1Q8IVT5 923 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 LACRTQ9GZZ8 138 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 GBA2Q9HCG7 927 aaPredicted RBP21.96■■□□□ 1.11
PTPN11-202ENST00000392597 PCDHA13Q9Y5I0 950 aa21.96■■□□□ 1.11
PTPN11-202ENST00000392597 RCCD1A6NED2 376 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 IRF6O14896 467 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 TLR2O60603 784 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 NCKAP1LP55160 1127 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 CYP27A1Q02318 531 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 TTLL12Q14166 644 aaPredicted RBP21.95■■□□□ 1.1
PTPN11-202ENST00000392597 ERCC6LQ2NKX8 1250 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 UTP14CQ5TAP6 766 aaKnown RBP21.95■■□□□ 1.1
PTPN11-202ENST00000392597 GADL1Q6ZQY3 521 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 HVCN1Q96D96 273 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 IKZF4Q9H2S9 585 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 C17orf75Q9HAS0 396 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 BTBD7Q9P203 1132 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 GABBR1Q9UBS5 961 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 KCNH4Q9UQ05 1017 aa21.95■■□□□ 1.1
PTPN11-202ENST00000392597 UNCXA6NJT0 531 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 UCHL3P15374 230 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 IRX3P78415 501 aaPredicted RBP21.94■■□□□ 1.1
PTPN11-202ENST00000392597 CST9Q5W186 159 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 MAEAQ7L5Y9 396 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 ELP3Q9H9T3 547 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 DAAM1Q9Y4D1 1078 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 ARID2Q68CP9 1835 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 SLC9A1P19634 815 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 CYP2J2P51589 502 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 ACTR2P61160 394 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 TUBB4BP68371 445 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 TDRD12Q587J7 1177 aaKnown RBP21.94■■□□□ 1.1
PTPN11-202ENST00000392597 ABHD15Q6UXT9 468 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 HAUS6Q7Z4H7 955 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 CEP112Q8N8E3 955 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 C2orf69Q8N8R5 385 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 KIFAP3Q92845 792 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 OTUD5Q96G74 571 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 SPATC1LQ9H0A9 340 aa21.94■■□□□ 1.1
PTPN11-202ENST00000392597 LUC7LQ9NQ29 371 aaKnown RBP21.94■■□□□ 1.1
PTPN11-202ENST00000392597 BZW2Q9Y6E2 419 aaKnown RBP21.94■■□□□ 1.1
PTPN11-202ENST00000392597 TMEM150BA6NC51 233 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 MAPK13O15264 365 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 PJA2O43164 708 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 ZNF862O60290 1169 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 STBD1O95210 358 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 NPEPPSP55786 919 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 PPIL2Q13356 520 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 RAPGEF1Q13905 1077 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 ASIC2Q16515 512 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 WHAMMP3Q1A5X7 153 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 PLA2G4FQ68DD2 849 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 MIS18BP1Q6P0N0 1132 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.93■■□□□ 1.1
PTPN11-202ENST00000392597 GCNT4Q9P109 453 aa21.93■■□□□ 1.1
PTPN11-202ENST00000392597 ANO9A1A5B4 782 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 EXOC3O60645 756 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 ANXA13P27216 316 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 COPB2P35606 906 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 FMO5P49326 533 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 ALDH5A1P51649 535 aaPredicted RBP21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SMTNP53814 917 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 AMPD2Q01433 879 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 RSRC2Q7L4I2 434 aaKnown RBP21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SRGAP1Q7Z6B7 1085 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SPIRE2Q8WWL2 714 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SECISBP2LQ93073 1101 aaKnown RBP21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SIX2Q9NPC8 291 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 AGTPBP1Q9UPW5 1226 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 DOCK5Q9H7D0 1870 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 EDNRBP24530 442 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms