RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 DENND3A2RUS2 1198 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 C9IYK1 514 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
SNRPN-202ENST00000390687 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.266e-7■■□□□ 11.7
SNRPN-202ENST00000390687 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
SNRPN-202ENST00000390687 MCM2P49736 904 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 FAM189BP81408 668 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 CDC42EP1Q00587 391 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 BTG3Q14201 252 aaPredicted RBP16.67■□□□□ 0.26
SNRPN-202ENST00000390687 DSC3Q14574 896 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 NLRP7Q8WX94 980 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 ADGRA3Q8IWK6 1321 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 COL4A6Q14031 1691 aa16.67■□□□□ 0.26
SNRPN-202ENST00000390687 A0A087WZ62 844 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 RHPN2Q8IUC4 686 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 KSR1Q8IVT5 923 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 CLP1Q92989 425 aaKnown RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 JPH2Q9BR39 696 aaPredicted RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 FDXACB1Q9BRP7 624 aaPredicted RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
SNRPN-202ENST00000390687 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 PPME1Q9Y570 386 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
SNRPN-202ENST00000390687 H3BNC9 293 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 LYPLA2O95372 231 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 FGFR4P22455 802 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 BMPR1AP36894 532 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 GATMP50440 423 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 TOB1P50616 345 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 XKR9Q5GH70 373 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 TTC38Q5R3I4 469 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 C4orf32Q8N8J7 132 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 SLC7A3Q8WY07 619 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 SCLT1Q96NL6 688 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 BACH2Q9BYV9 841 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 GCOM2Q9BZD3 368 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 A0A087WWV3 80 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 DLL1O00548 723 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 RFC5P40937 340 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 TECP42680 631 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 GPM6BQ13491 265 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 NBR1Q14596 966 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 EXOC8Q8IYI6 725 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 CMTR2Q8IYT2 770 aaKnown RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 PRPF31Q8WWY3 499 aaKnown RBP16.65■□□□□ 0.26
SNRPN-202ENST00000390687 TMEM143Q96AN5 459 aa16.65■□□□□ 0.26
SNRPN-202ENST00000390687 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
SNRPN-202ENST00000390687 C5orf67F2Z3F1 127 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 RB1P06400 928 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
SNRPN-202ENST00000390687 GJB2P29033 226 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 CTNNB1P35222 781 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 PAN2Q504Q3 1202 aaKnown RBP16.64■□□□□ 0.25
SNRPN-202ENST00000390687 FAM102BQ5T8I3 360 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
SNRPN-202ENST00000390687 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
SNRPN-202ENST00000390687 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
SNRPN-202ENST00000390687 MYO7AQ13402 2215 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 SKIV2LQ15477 1246 aaKnown RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 PIGOQ8TEQ8 1089 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 ATXN2LQ8WWM7 1075 aaKnown RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 NLRP4Q96MN2 994 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 ELAC1Q9H777 363 aaKnown RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 IFT122Q9HBG6 1241 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 TMEM161AQ9NX61 479 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 THEGQ9P2T0 379 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 NOL7Q9UMY1 257 aaKnown RBP16.63■□□□□ 0.25
SNRPN-202ENST00000390687 RWDD3Q9Y3V2 267 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 COL4A3BPQ9Y5P4 624 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 TTC28Q96AY4 2481 aa16.63■□□□□ 0.25
SNRPN-202ENST00000390687 NLRC5Q86WI3 1866 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 MED24O75448 989 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 FGFR1P11362 822 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 XRCC6P12956 609 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNRPN-202ENST00000390687 LAMTOR4Q0VGL1 99 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 EMC2Q15006 297 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 PSPC1Q8WXF1 523 aaKnown RBP16.62■□□□□ 0.25
SNRPN-202ENST00000390687 MRPL38Q96DV4 380 aaKnown RBP16.62■□□□□ 0.25
SNRPN-202ENST00000390687 INO80BQ9C086 356 aaPredicted RBP16.62■□□□□ 0.25
SNRPN-202ENST00000390687 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
SNRPN-202ENST00000390687 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms