RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
SPTBN1-203ENST00000389980 ZNF236Q9UL36 1845 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 TISP43B9A030 160 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 DYNC1I1O14576 645 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 NR3C1P04150 777 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.263e-7■■□□□ 12.2
SPTBN1-203ENST00000389980 NPTX2P47972 431 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CASP4P49662 377 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 KLK7P49862 253 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CCZ1BP86790 482 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CCZ1P86791 482 aaPredicted RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 RBL2Q08999 1139 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 EMC2Q15006 297 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 HAUS6Q7Z4H7 955 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 TIPINQ9BVW5 301 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CETN3O15182 167 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 LGR5O75473 907 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 SMPD1P17405 629 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 DNTTIP2Q5QJE6 756 aaKnown RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CCDC155Q8N6L0 562 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 AFG1LQ8WV93 481 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 CEP63Q96MT8 703 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 ARHGAP39Q9C0H5 1083 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 ABHD16BQ9H3Z7 469 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 NRBP2Q9NSY0 501 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 EVPLQ92817 2033 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 BRCA2P51587 3418 aa13.41□□□□□ -0.26
SPTBN1-203ENST00000389980 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 MGAMO43451 1857 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 RNF225M0QZC1 329 aaPredicted RBP13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 CA12O43570 354 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 GH1P01241 217 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 SKILP12757 684 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 CYP2C19P33261 490 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 NCKAP1LP55160 1127 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 TBC1D8BQ0IIM8 1120 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 TARBP2Q15633 366 aaKnown RBP13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 VWA3BQ502W6 1294 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 STXBP4Q6ZWJ1 553 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 CCDC150Q8NCX0 1101 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 KIFAP3Q92845 792 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 SLC5A4Q9NY91 659 aa13.4□□□□□ -0.26
SPTBN1-203ENST00000389980 TNPO2O14787 897 aaKnown RBP13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 AKAP3O75969 853 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 GYPCP04921 128 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 CASP14P31944 242 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 DNM2P50570 870 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 DRP2Q13474 957 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 TMEM161BQ8NDZ6 487 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 KIAA1524Q8TCG1 905 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 USP6NLQ92738 828 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 GBP3Q9H0R5 595 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 AGPAT3Q9NRZ7 376 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 UBE4BO95155 1302 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 ZNF286BP0CG31 522 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 MAPTP10636 758 aaKnown RBP13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 CYP2J2P51589 502 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 GTF2BQ00403 316 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 SYCP1Q15431 976 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 PLPPR4Q7Z2D5 763 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 ASAP3Q8TDY4 903 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC7A3Q8WY07 619 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
SPTBN1-203ENST00000389980 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 LGALS2P05162 132 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 SMTNP53814 917 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 DUSP28Q4G0W2 176 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 HS2ST1Q7LGA3 356 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 TRIM59Q8IWR1 403 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
SPTBN1-203ENST00000389980 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms