RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SPAG7O75391 227 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 SLC9A1P19634 815 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 CCND1P24385 295 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 PBX1P40424 430 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 SH2D4BQ5SQS7 431 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 EPM2AIP1Q7L775 607 aaPredicted RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 ZNF34Q8IZ26 560 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 HIPK4Q8NE63 616 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 DTX3LQ8TDB6 740 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 PACSIN1Q9BY11 444 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 ARL2BPQ9Y2Y0 163 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 MAPK4P31152 587 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 DNAAF5Q86Y56 855 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 RNF168Q8IYW5 571 aaPredicted RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 PIGOQ8TEQ8 1089 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 DUSP9Q99956 384 aaKnown RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 WNT7AO00755 349 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 SNAP25P60880 206 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 SLC29A2Q14542 456 aa15.33■□□□□ 0.04
RTF1-201ENST00000389629 KNOP1Q1ED39 458 aaKnown RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.04
RTF1-201ENST00000389629 FOXP2O15409 715 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
RTF1-201ENST00000389629 PTK2Q05397 1052 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 GLG1Q92896 1179 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 MIEF2Q96C03 454 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 HEMGNQ9BXL5 484 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 ANO3Q9BYT9 981 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 DCTN3O75935 186 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 CAVIN3Q969G5 261 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 DLATP10515 647 aaKnown RBP15.32■□□□□ 0.04
RTF1-201ENST00000389629 CTTNQ14247 550 aaKnown RBP15.32■□□□□ 0.04
RTF1-201ENST00000389629 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
RTF1-201ENST00000389629 KAT2BQ92831 832 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 FGD4Q96M96 766 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 ZFP69BQ9UJL9 534 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 ATP6V1G2O95670 118 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 FGFR2P21802 821 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 CDK17Q00537 523 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
RTF1-201ENST00000389629 NAALADL2Q58DX5 795 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 TMEM154Q6P9G4 183 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 SERPINB13Q9UIV8 391 aa15.32■□□□□ 0.04
RTF1-201ENST00000389629 UCHL3P15374 230 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 PHBP35232 272 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 BFSP1Q12934 665 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 TMED1Q13445 227 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 SPARCL1Q14515 664 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 NWD1Q149M9 1564 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 MEA1Q16626 185 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.31■□□□□ 0.04
RTF1-201ENST00000389629 TLR10Q9BXR5 811 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 CAND2O75155 1236 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 GAP43P17677 238 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 HSPA9P38646 679 aaKnown RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 ITIH3Q06033 890 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 EXOC7Q9UPT5 735 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 LEMD3Q9Y2U8 911 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 RBM26Q5T8P6 1007 aaKnown RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 KLHDC7AQ5VTJ3 777 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 RSAD2Q8WXG1 361 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 RAB20Q9NX57 234 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 DLGAP2Q9P1A6 1054 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 FAF1Q9UNN5 650 aaPredicted RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 AGTP01019 485 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 SKOR1P84550 965 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 CDR2Q01850 454 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 BBOF1Q8ND07 529 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 MAML1Q92585 1016 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 ERP27Q96DN0 273 aa15.31■□□□□ 0.04
RTF1-201ENST00000389629 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
RTF1-201ENST00000389629 CFAP69A5D8W1 941 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 OPLAHO14841 1288 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 FANCGO15287 622 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 PLS3P13797 630 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 VEGFAP15692 232 aaPredicted RBP15.3■□□□□ 0.04
RTF1-201ENST00000389629 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
RTF1-201ENST00000389629 GALCP54803 685 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 ICA1Q05084 483 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 KLC1Q07866 573 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 RHOT2Q8IXI1 618 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 C1orf54Q8WWF1 131 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 TTC1Q99614 292 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 SYNGAP1Q96PV0 1343 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 ZNF233A6NK53 670 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 CREB3O43889 395 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 HOXA13P31271 388 aaPredicted RBP15.3■□□□□ 0.04
RTF1-201ENST00000389629 SLC8A3P57103 927 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms