RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 TOP1MTQ969P6 601 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 FUBP3Q96I24 572 aaKnown RBP eCLIP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 WWC2-AS2Q96NR7 200 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 GAD1Q99259 594 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 OXCT2Q9BYC2 517 aaPredicted RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 ALDH8A1Q9H2A2 487 aaPredicted RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 TDRD3Q9H7E2 651 aaKnown RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 MCCC2Q9HCC0 563 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 AAASQ9NRG9 546 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 RBPJLQ9UBG7 517 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 SUSD2Q9UGT4 822 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 PUF60Q9UHX1 559 aaKnown RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 DDX41Q9UJV9 622 aaKnown RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 CDC42EP3Q9UKI2 254 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 PPM1HQ9ULR3 514 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 DAAM1Q9Y4D1 1078 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 FLG2Q5D862 2391 aaPredicted RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 A0A1W2PP64 1363 aa1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 ZNF469Q96JG9 3925 aaPredicted RBP1.47□□□□□ -2.17
RNU6-42P-201ENST00000384165 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 NCANO14594 1321 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SYNRGQ9UMZ2 1314 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 LRRK1Q38SD2 2015 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TTC24A2A3L6 582 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SFI1A8K8P3 1242 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 C19orf81C9J6K1 198 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ATP5J2-PTCD1G3V325 749 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CBX4O00257 560 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PROM1O43490 865 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 KIF1CO43896 1103 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZNF862O60290 1169 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PEX10O60683 326 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PAPSS2O95340 614 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 A1BGP04217 495 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ELFN1P0C7U0 828 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CDK4P11802 303 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PRKCSHP14314 528 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PTPRAP18433 802 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CST5P28325 142 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SLC6A4P31645 630 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 GGT5P36269 586 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ERVPABLB-1P60509 514 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 HERVK_113P62684 666 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SRSF2Q01130 221 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TLE4Q04727 773 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CBLBQ13191 982 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SNTB1Q13884 538 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 DSG2Q14126 1118 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 BTG3Q14201 252 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 BMS1Q14692 1282 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 KIZQ2M2Z5 673 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 KLHL22Q53GT1 634 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 RTL5Q5HYW3 569 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PRR31Q5SQ13 230 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 NOL9Q5SY16 702 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SLC23A3Q6PIS1 610 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 C3orf67Q6ZVT6 689 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 USP49Q70CQ1 688 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 NOL8Q76FK4 1167 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PPP1R42Q7Z4L9 355 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 XYLT1Q86Y38 959 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 AEBP1Q8IUX7 1158 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SYT12Q8IV01 421 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CDAN1Q8IWY9 1227 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZNF295-AS1Q8N0V1 137 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 BEND7Q8N7W2 519 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 KRI1Q8N9T8 703 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 Q8NA96 180 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 NSUN7Q8NE18 718 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 USP33Q8TEY7 942 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PTCD2Q8WV60 388 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CLP1Q92989 425 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 MMS19Q96T76 1030 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 IFIH1Q9BYX4 1025 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SLC29A3Q9BZD2 475 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TRIM8Q9BZR9 551 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TXNRD2Q9NNW7 524 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 CCM2LQ9NUG4 571 aaPredicted RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TRMT13Q9NUP7 481 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 DNAAF2Q9NVR5 837 aaKnown RBP1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 EPS15L1Q9UBC2 864 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 COPG2Q9UBF2 871 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 TUBD1Q9UJT1 453 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 PCOLCE2Q9UKZ9 415 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 SLC8A2Q9UPR5 921 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 DUSP10Q9Y6W6 482 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 VPS8Q8N3P4 1428 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZGRF1Q86YA3 2104 aa1.46□□□□□ -2.18
RNU6-42P-201ENST00000384165 ADGRA3Q8IWK6 1321 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 PTPRBP23467 1997 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 TET1Q8NFU7 2136 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 LCE6AA0A183 80 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 MYADML2A6NDP7 307 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 E9PSI1 815 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 NRG2O14511 850 aaPredicted RBP1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 ARHGAP33O14559 1287 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZNF213O14771 459 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 DCLK1O15075 740 aa1.45□□□□□ -2.18
RNU6-42P-201ENST00000384165 PIN1P1O15428 100 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms