RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 FAM84AQ96KN4 292 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 IFT74Q96LB3 600 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 SH3GL3Q99963 347 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 KLHL11Q9NVR0 708 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 SIK3Q9Y2K2 1263 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
TUSC3-201ENST00000382020 LRRD1A4D1F6 860 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 TTLL1O95922 423 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 MYL7Q01449 175 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
TUSC3-201ENST00000382020 FBXO25Q8TCJ0 367 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 EPS8L3Q8TE67 593 aaKnown RBP16.04■□□□□ 0.16
TUSC3-201ENST00000382020 CD209Q9NNX6 404 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
TUSC3-201ENST00000382020 CALCAP01258 141 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 ICA1Q05084 483 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 SEPT2Q15019 361 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 TMED2Q15363 201 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 DDX23Q9BUQ8 820 aaKnown RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 OSBPL1AQ9BXW6 950 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 ALG13Q9NP73 1137 aaKnown RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 NAGPAQ9UK23 515 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 MYH2Q9UKX2 1941 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 COG2Q14746 738 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 SPRED3Q2MJR0 410 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 GLE1Q53GS7 698 aaKnown RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 LMBRD2Q68DH5 695 aaPredicted RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 PASD1Q8IV76 773 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 ECT2Q9H8V3 914 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 CLRN2A0PK11 232 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 GOLGA8MH3BSY2 632 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 SPAG7O75391 227 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 MED24O75448 989 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 MUM1Q2TAK8 710 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
TUSC3-201ENST00000382020 FBXO11Q86XK2 927 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 TCHPQ9BT92 498 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 FGFR1OP2Q9NVK5 253 aa16.03■□□□□ 0.16
TUSC3-201ENST00000382020 KDM3AQ9Y4C1 1321 aa16.02■□□□□ 0.16
TUSC3-201ENST00000382020 TLR2O60603 784 aa16.02■□□□□ 0.16
TUSC3-201ENST00000382020 FTLP02792 175 aaPredicted RBP16.02■□□□□ 0.16
TUSC3-201ENST00000382020 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.16
TUSC3-201ENST00000382020 STXBP4Q6ZWJ1 553 aa16.02■□□□□ 0.16
TUSC3-201ENST00000382020 FBXO33Q7Z6M2 555 aa16.02■□□□□ 0.16
TUSC3-201ENST00000382020 DHX36Q9H2U1 1008 aaKnown RBP16.02■□□□□ 0.16
TUSC3-201ENST00000382020 NFAT5O94916 1531 aa16.02■□□□□ 0.16
TUSC3-201ENST00000382020 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
TUSC3-201ENST00000382020 EME2A4GXA9 379 aaPredicted RBP16.02■□□□□ 0.15
TUSC3-201ENST00000382020 CCT8L1PA6NM43 557 aa16.02■□□□□ 0.15
TUSC3-201ENST00000382020 ARHGAP4P98171 946 aa16.02■□□□□ 0.15
TUSC3-201ENST00000382020 KNOP1Q1ED39 458 aaKnown RBP16.02■□□□□ 0.15
TUSC3-201ENST00000382020 PBKQ96KB5 322 aa16.02■□□□□ 0.15
TUSC3-201ENST00000382020 TRPC6Q9Y210 931 aa16.02■□□□□ 0.15
TUSC3-201ENST00000382020 TCP11X1B4DZS4 312 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 IGF2BP3O00425 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
TUSC3-201ENST00000382020 PMS2P54278 862 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 LINC00116Q8NCU8 138 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 SCFD1Q8WVM8 642 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 C9orf72Q96LT7 481 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 MTA3Q9BTC8 594 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 AKAP3O75969 853 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 DDR1Q08345 913 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 SGO2Q562F6 1265 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
TUSC3-201ENST00000382020 NEUROG2Q9H2A3 272 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 FLT1P17948 1338 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
TUSC3-201ENST00000382020 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 PIAS1O75925 651 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 SHBGP04278 402 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 DYNLT1P63172 113 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 TRIM4Q9C037 500 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 THAP2Q9H0W7 228 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 ATP6V0A4Q9HBG4 840 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 FAM114A2Q9NRY5 505 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 USH1CQ9Y6N9 552 aa16.01■□□□□ 0.15
TUSC3-201ENST00000382020 SETD1AO15047 1707 aaKnown RBP16.01■□□□□ 0.15
TUSC3-201ENST00000382020 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 ELF3P78545 371 aaPredicted RBP16■□□□□ 0.15
TUSC3-201ENST00000382020 GPSM2P81274 684 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 NEDD1Q8NHV4 660 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 AGAP11Q8TF27 550 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 ATG4AQ8WYN0 398 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 BAP1Q92560 729 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 DYDC2Q96IM9 177 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 XPO6Q96QU8 1125 aaKnown RBP16■□□□□ 0.15
TUSC3-201ENST00000382020 RNF14Q9UBS8 474 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 NR2E1Q9Y466 385 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 ZNF844Q08AG5 666 aa16■□□□□ 0.15
TUSC3-201ENST00000382020 CUL1Q13616 776 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms