RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 HLFQ16534 295 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 PREPLQ4J6C6 727 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 TTI2Q6NXR4 508 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 MIEF2Q96C03 454 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 NDE1Q9NXR1 346 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 RNF8O76064 485 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 BMP6P22004 513 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 NTRK3Q16288 839 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 AFAP1L2Q8N4X5 818 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 OLFM3Q96PB7 478 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 DCP1AQ9NPI6 582 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-201ENST00000381337 H7C0C1 242 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ATP6V1G2O95670 118 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 GGPS1O95749 300 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 KRT1P04264 644 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 UCHL3P15374 230 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ATP5OP48047 213 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 BASP1P80723 227 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PDE1BQ01064 536 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ITIH4Q14624 930 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 C1orf54Q8WWF1 131 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 MOV10L1Q9BXT6 1211 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 IQANK1A0A1B0GTG1 560 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 MYMKA6NI61 221 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 POTECB2RU33 542 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 POLR2BP30876 1174 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TMPRSS15P98073 1019 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TRIM28Q13263 835 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 STAT4Q14765 748 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PDCD2Q16342 344 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 CREG2Q8IUH2 290 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 EPB41L4AQ9HCS5 686 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 GNPATO15228 680 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ORC4O43929 436 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ACTN1P12814 892 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 AP2B1P63010 937 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TTC25Q96NG3 672 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ROPN1BQ9BZX4 212 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 ROPN1Q9HAT0 212 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 TTC7AQ9ULT0 858 aaPredicted RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 CPS1P31327 1500 aa12.29□□□□□ -0.44
THUMPD1-201ENST00000381337 PFASO15067 1338 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TDP2O95551 362 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 GHRP10912 638 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 KCNA3P22001 575 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 ANXA13P27216 316 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 GRM4Q14833 912 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 YTHDF3Q7Z739 585 aaKnown RBP12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 CPXCR1Q8N123 301 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TRIML2Q8N7C3 387 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 hCG_2014768A0A024R1R8 64 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 HNRNPCL1O60812 293 aaKnown RBP12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 CAND2O75155 1236 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TOM1L1O75674 476 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 UBOX5O94941 541 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 SOX5P35711 763 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 GTF2IP78347 998 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 TMED8Q6PL24 325 aaPredicted RBP12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
THUMPD1-201ENST00000381337 CRLF3Q8IUI8 442 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms