RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PPP1R3GB7ZBB8 358 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MAFGO15525 162 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 EDRF1Q3B7T1 1238 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 CASC4Q6P4E1 433 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MOXD1Q6UVY6 613 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 CERS5Q8N5B7 392 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MYL3P08590 195 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 SREBF1P36956 1147 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 FXR1P51114 621 aaKnown RBP eCLIP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 BACE1P56817 501 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 GRB10Q13322 594 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MRPL4Q9BYD3 311 aaKnown RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 A6NNZ2 444 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 WNT10BO00744 389 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 KRT15P19012 456 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-203ENST00000380877 TUBB8Q3ZCM7 444 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 XRRA1Q6P2D8 792 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 CCDC121Q6ZUS5 278 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 TAOK1Q7L7X3 1001 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 EPB41L5Q9HCM4 733 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 DAAM1Q9Y4D1 1078 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 EIF3CLB5ME19 914 aaKnown RBP13.21□□□□□ -0.29
GABPB1-203ENST00000380877 MYBP10242 640 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 FKBP1AP62942 108 aaKnown RBP13.21□□□□□ -0.29
GABPB1-203ENST00000380877 KCTD17Q8N5Z5 321 aa13.21□□□□□ -0.29
GABPB1-203ENST00000380877 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
GABPB1-203ENST00000380877 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
GABPB1-203ENST00000380877 CCDC151A5D8V7 595 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 ATF2P15336 505 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 PDXDC1Q6P996 788 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 CHST13Q8NET6 341 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.3
GABPB1-203ENST00000380877 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.3
GABPB1-203ENST00000380877 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PALMO75781 387 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CCZ1BP86790 482 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CCZ1P86791 482 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PLCB1Q9NQ66 1216 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 RBAKQ9NYW8 714 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CYTH3O43739 400 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 HSPA6P17066 643 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PARD6BQ9BYG5 372 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 GABPB1Q06547 395 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 TMEM270Q6UE05 265 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CHP1Q99653 195 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 FUCA2Q9BTY2 467 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PFASO15067 1338 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 ITIH6Q6UXX5 1313 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 SLC25A27O95847 323 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 ARL1P40616 181 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
GABPB1-203ENST00000380877 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
GABPB1-203ENST00000380877 GNAT1P11488 350 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 PLS3P13797 630 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 CYP11B2P19099 503 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 EFNA5P52803 228 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 NPEPPSP55786 919 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 PRKCEQ02156 737 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 OR6B2Q6IFH4 312 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 UHMK1Q8TAS1 419 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 CNOT8Q9UFF9 292 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 A6NJR5 290 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 VCAM1P19320 739 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms