RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SMAP1Q8IYB5 467 aaPredicted RBP25.28■■□□□ 1.64
VPS16-201ENST00000380443 SYCP3Q8IZU3 236 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 ACAD9Q9H845 621 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 MYH11P35749 1972 aa25.27■■□□□ 1.64
VPS16-201ENST00000380443 NFASCO94856 1347 aa25.27■■□□□ 1.64
VPS16-201ENST00000380443 CCDC151A5D8V7 595 aa25.27■■□□□ 1.64
VPS16-201ENST00000380443 ATP1A1P05023 1023 aaKnown RBP25.27■■□□□ 1.64
VPS16-201ENST00000380443 PRKCIP41743 596 aa25.27■■□□□ 1.64
VPS16-201ENST00000380443 MOV10L1Q9BXT6 1211 aaKnown RBP25.27■■□□□ 1.64
VPS16-201ENST00000380443 PARD6BQ9BYG5 372 aa25.27■■□□□ 1.64
VPS16-201ENST00000380443 MACROD2A1Z1Q3 448 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 MAPK13O15264 365 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 SLC9A1P19634 815 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 IQCEQ6IPM2 695 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 OTUD6AQ7L8S5 288 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 HVCN1Q96D96 273 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 NOX5Q96PH1 765 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 BCAS3Q9H6U6 928 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 POLD4Q9HCU8 107 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 TSKSQ9UJT2 592 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 CLEC11AQ9Y240 323 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 RIPK3Q9Y572 518 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 PCDHA10Q9Y5I2 948 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 TESPA1A2RU30 521 aaPredicted RBP25.26■■□□□ 1.63
VPS16-201ENST00000380443 K7ENM7 598 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 GFPT2O94808 682 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 ZRANB2O95218 330 aaKnown RBP eCLIP25.26■■□□□ 1.63
VPS16-201ENST00000380443 GFPT1Q06210 699 aaPredicted RBP25.26■■□□□ 1.63
VPS16-201ENST00000380443 SMC1BQ8NDV3 1235 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.26■■□□□ 1.63
VPS16-201ENST00000380443 HNRNPLLQ8WVV9 542 aaKnown RBP25.26■■□□□ 1.63
VPS16-201ENST00000380443 RAB21Q9UL25 225 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 TFR2Q9UP52 801 aa25.26■■□□□ 1.63
VPS16-201ENST00000380443 BTNL10A8MVZ5 291 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 RFX1P22670 979 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 GTF2BQ00403 316 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 VTI1AQ96AJ9 217 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 C17orf75Q9HAS0 396 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 GCNT4Q9P109 453 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 DUSP10Q9Y6W6 482 aa25.25■■□□□ 1.63
VPS16-201ENST00000380443 ZSCAN20P17040 1043 aaPredicted RBP25.24■■□□□ 1.63
VPS16-201ENST00000380443 FMO5P49326 533 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 TMEM132BQ14DG7 1078 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 IRF2BP2Q7Z5L9 587 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 CHST13Q8NET6 341 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 ATP6V0A1Q93050 837 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 WNK4Q96J92 1243 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 ARFGAP3Q9NP61 516 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 ZNF446Q9NWS9 450 aa25.24■■□□□ 1.63
VPS16-201ENST00000380443 P4HA2O15460 535 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 ATP9AO75110 1047 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 FERP16591 822 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 TCP1P17987 556 aaKnown RBP25.23■■□□□ 1.63
VPS16-201ENST00000380443 MCM3P25205 808 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 HIRAP54198 1017 aaPredicted RBP25.23■■□□□ 1.63
VPS16-201ENST00000380443 JAM2P57087 298 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 INTS8Q75QN2 995 aaKnown RBP25.23■■□□□ 1.63
VPS16-201ENST00000380443 VPS36Q86VN1 386 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 KRT222Q8N1A0 295 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 FAM133AQ8N9E0 248 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 SIX2Q9NPC8 291 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 CYP39A1Q9NYL5 469 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 EXOC7Q9UPT5 735 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 COL11A1P12107 1806 aaPredicted RBP25.23■■□□□ 1.63
VPS16-201ENST00000380443 ENC1O14682 589 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 EXOC3O60645 756 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 N4BP1O75113 896 aaKnown RBP25.23■■□□□ 1.63
VPS16-201ENST00000380443 CCNE2O96020 404 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 KRT13P13646 458 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 ITIH3Q06033 890 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 FSTL1Q12841 308 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 GNPTABQ3T906 1256 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 KCNG1Q9UIX4 513 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 SNX12Q9UMY4 172 aa25.23■■□□□ 1.63
VPS16-201ENST00000380443 SSC5DA1L4H1 1573 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 ERLIN1O75477 346 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 USP2O75604 605 aaPredicted RBP25.22■■□□□ 1.63
VPS16-201ENST00000380443 CCDC172P0C7W6 258 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 ACTN1P12814 892 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 ABCD1P33897 745 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 SMTNP53814 917 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 NCKAP1LP55160 1127 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 MCCD1P59942 119 aaPredicted RBP25.22■■□□□ 1.63
VPS16-201ENST00000380443 NAB2Q15742 525 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 PRAMEF18Q5VWM3 479 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 CC2D1AQ6P1N0 951 aaPredicted RBP25.22■■□□□ 1.63
VPS16-201ENST00000380443 FHOD1Q9Y613 1164 aa25.22■■□□□ 1.63
VPS16-201ENST00000380443 PSAPP07602 524 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 STAT1P42224 750 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 CYP2J2P51589 502 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 BFSP1Q12934 665 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 XKR9Q5GH70 373 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 DNERQ8NFT8 737 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 ZC3H15Q8WU90 426 aaKnown RBP25.21■■□□□ 1.63
VPS16-201ENST00000380443 STK33Q9BYT3 514 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 ANKZF1Q9H8Y5 726 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 SPDYE16A6NNV3 312 aaPredicted RBP25.21■■□□□ 1.63
VPS16-201ENST00000380443 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 KCNA2P16389 499 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms