RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZNF558Q96NG5 402 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 SLC26A6Q9BXS9 759 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 NRBP2Q9NSY0 501 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 FSCN2O14926 492 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 ZXDAP98168 799 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 PRKCEQ02156 737 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 KCNT2Q6UVM3 1135 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 CASD1Q96PB1 797 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 DISC1Q9NRI5 854 aa26.1■■□□□ 1.77
U2AF1-202ENST00000380276 GAS7O60861 476 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 FGFR4P22455 802 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 SP100P23497 879 aaPredicted RBP26.09■■□□□ 1.77
U2AF1-202ENST00000380276 KRT17Q04695 432 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 TMC7Q7Z402 723 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 ECHDC2Q86YB7 292 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 NLRP7Q8WX94 980 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 CCDC136Q96JN2 1154 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 VPS54Q9P1Q0 977 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 LZTS1Q9Y250 596 aa26.09■■□□□ 1.77
U2AF1-202ENST00000380276 EIF4BP23588 611 aaKnown RBP26.08■■□□□ 1.77
U2AF1-202ENST00000380276 CIITAP33076 1130 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 PPM1AP35813 382 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 PLCB3Q01970 1234 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 CBX2Q14781 532 aaPredicted RBP26.08■■□□□ 1.77
U2AF1-202ENST00000380276 LRRC55Q6ZSA7 311 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 ZBTB33Q86T24 672 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 TEKT3Q9BXF9 490 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 ADAMTS10Q9H324 1103 aa26.08■■□□□ 1.77
U2AF1-202ENST00000380276 HIDE1A8MVS5 230 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 MSH4O15457 936 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 ZNF862O60290 1169 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 ATF7P17544 494 aaPredicted RBP26.07■■□□□ 1.76
U2AF1-202ENST00000380276 NLRP5P59047 1200 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 TBC1D8BQ0IIM8 1120 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 UGCGQ16739 394 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 LRCH2Q5VUJ6 765 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 ANKRD54Q6NXT1 300 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 NGRNQ9NPE2 291 aaKnown RBP26.07■■□□□ 1.76
U2AF1-202ENST00000380276 RNF19AQ9NV58 838 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 SPG21Q9NZD8 308 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 SNX14Q9Y5W7 946 aa26.07■■□□□ 1.76
U2AF1-202ENST00000380276 GPC3P51654 580 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 CCT2P78371 535 aaKnown RBP26.06■■□□□ 1.76
U2AF1-202ENST00000380276 BMP8AQ7Z5Y6 402 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 LINC01465Q8N7H1 131 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 HELQQ8TDG4 1101 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 SUSD6Q92537 303 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 LENG9Q96B70 501 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 RNF26Q9BY78 433 aaPredicted RBP26.06■■□□□ 1.76
U2AF1-202ENST00000380276 UNC45AQ9H3U1 944 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 TSHZ2Q9NRE2 1034 aa26.06■■□□□ 1.76
U2AF1-202ENST00000380276 SEPT9Q9UHD8 586 aaPredicted RBP26.06■■□□□ 1.76
U2AF1-202ENST00000380276 DARSP14868 501 aaKnown RBP26.05■■□□□ 1.76
U2AF1-202ENST00000380276 RPS6KB1P23443 525 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 JAK3P52333 1124 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 MTERF2Q49AM1 385 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 ZNF710Q8N1W2 664 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 GJA10Q969M2 543 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 NID2Q14112 1375 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 TECTAO75443 2155 aa26.05■■□□□ 1.76
U2AF1-202ENST00000380276 SFNP31947 248 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 CLLU1OSQ5K130 101 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 MIER3Q7Z3K6 550 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 PRSS33Q8NF86 280 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 RIT2Q99578 217 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 NCOA5Q9HCD5 579 aaKnown RBP26.04■■□□□ 1.76
U2AF1-202ENST00000380276 WDR81Q562E7 1941 aa26.04■■□□□ 1.76
U2AF1-202ENST00000380276 CSDE1O75534 798 aaKnown RBP26.03■■□□□ 1.76
U2AF1-202ENST00000380276 HSPA4P34932 840 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 SIGLEC14Q08ET2 396 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 SMC1AQ14683 1233 aaKnown RBP26.03■■□□□ 1.76
U2AF1-202ENST00000380276 IER5LQ5T953 404 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 SYCE2Q6PIF2 218 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 FBXL6Q8N531 539 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 TMEM87AQ8NBN3 555 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 CASP10Q92851 521 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 S1PR5Q9H228 398 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 DACT1Q9NYF0 836 aa26.03■■□□□ 1.76
U2AF1-202ENST00000380276 NT5C1B-RDH14C9J2C7 533 aa26.02■■□□□ 1.76
U2AF1-202ENST00000380276 PTPN5P54829 565 aa26.02■■□□□ 1.76
U2AF1-202ENST00000380276 TMEM184AQ6ZMB5 413 aa26.02■■□□□ 1.76
U2AF1-202ENST00000380276 TBCKQ8TEA7 893 aa26.02■■□□□ 1.76
U2AF1-202ENST00000380276 SLC5A5Q92911 643 aa26.02■■□□□ 1.76
U2AF1-202ENST00000380276 GCOM2Q9BZD3 368 aaPredicted RBP26.02■■□□□ 1.76
U2AF1-202ENST00000380276 IFNAR1P17181 557 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 PSMA5P28066 241 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 USP11P51784 963 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 DRP2Q13474 957 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 KCNC3Q14003 757 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 BMS1Q14692 1282 aaKnown RBP26.01■■□□□ 1.75
U2AF1-202ENST00000380276 NTRK3Q16288 839 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 PTPN21Q16825 1174 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 LONRF3Q496Y0 759 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 TPRNQ4KMQ1 711 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 TRIM22Q8IYM9 498 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 SLC39A11Q8N1S5 342 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 KCNB2Q92953 911 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 SH2D3AQ9BRG2 576 aa26.01■■□□□ 1.75
U2AF1-202ENST00000380276 MRPL9Q9BYD2 267 aaKnown RBP26.01■■□□□ 1.75
U2AF1-202ENST00000380276 A0A0U1RQF3 1178 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms