RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 MYBL2P10244 700 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 VCAM1P19320 739 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 NAP1L1P55209 391 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 RPS6P62753 249 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 KIAA0753Q2KHM9 967 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 MICALL2Q8IY33 904 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM186BQ8IYM0 893 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 NOX5Q96PH1 765 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 METTL14Q9HCE5 456 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 GCNT4Q9P109 453 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 HACL1Q9UJ83 578 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 ZHX2Q9Y6X8 837 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 DOCK5Q9H7D0 1870 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 ARHGEF35A5YM69 484 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 ATP9AO75110 1047 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 PALMO75781 387 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 GMPSP49915 693 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 GYS2P54840 703 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 TGFB2P61812 414 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 CKAP4Q07065 602 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 NAB2Q15742 525 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 UTP14CQ5TAP6 766 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 PADI6Q6TGC4 694 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 GSPT2Q8IYD1 628 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 HDAC7Q8WUI4 952 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 LPAR1Q92633 364 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 MS4A14Q96JA4 679 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 ALS2CR12Q96Q35 445 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 SPAG5Q96R06 1193 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 AGO4Q9HCK5 861 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 AGPAT3Q9NRZ7 376 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 ODF2LQ9ULJ1 636 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 RIPK3Q9Y572 518 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 UBIAD1Q9Y5Z9 338 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 KIAA1217Q5T5P2 1943 aa8.71□□□□□ -1.02
PDLIM5-204ENST00000380176 LRRIQ3A6PVS8 624 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 N4BP1O75113 896 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 ERLIN1O75477 346 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 FTCDO95954 541 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 TRIM49P0CI25 452 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 TRIM49CP0CI26 452 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 BCRP11274 1271 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 MYCLP12524 364 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 MUTP22033 750 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 PSMC2P35998 433 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.028e-7■□□□□ 10.3
PDLIM5-204ENST00000380176 DNA2P51530 1060 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 JAM2P57087 298 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 CASP8Q14790 479 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 UGCGQ16739 394 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 CBWD6Q4V339 395 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 CBWD3Q5JTY5 395 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 CBWD5Q5RIA9 395 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 PCNX4Q63HM2 1172 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GBP6Q6ZN66 633 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 STRA6Q9BX79 667 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 RPAP3Q9H6T3 665 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 DMAC2Q9NW81 257 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 SAMM50Q9Y512 469 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 RLFQ13129 1914 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 DPYSL4O14531 572 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 CTNND1O60716 968 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 P4HBP07237 508 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 PRLRP16471 622 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 MTMR1Q13613 665 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 TNIP1Q15025 636 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 PGM5Q15124 567 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 HDXQ7Z353 690 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 RNF10Q8N5U6 811 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 ZSWIM2Q8NEG5 633 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 SPATA4Q8NEY3 305 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 ZKSCAN4Q969J2 545 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GDAP1L1Q96MZ0 367 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GBP3Q9H0R5 595 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 GOLPH3Q9H4A6 298 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 SEL1LQ9UBV2 794 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 ZHX1Q9UKY1 873 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 PPP1R9AQ9ULJ8 1098 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 BCS1LQ9Y276 419 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 HYOU1Q9Y4L1 999 aa8.7□□□□□ -1.02
PDLIM5-204ENST00000380176 FAM170AA1A519 330 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 RARRES1P49788 294 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GHRHRQ02643 423 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 NFIL3Q16649 462 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF771Q7L3S4 317 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 ATG4CQ96DT6 458 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 RPGRIP1Q96KN7 1286 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms