RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 SHISA4Q96DD7 197 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 TUBGCP6Q96RT7 1819 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 NMT1P30419 496 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 HHATQ5VTY9 493 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 TMBIM4Q9HC24 238 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 DBR1Q9UK59 544 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 POC1B-GALNT4F8VUJ3 575 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 PDHBP11177 359 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 GCKP35557 465 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 EIF3BP55884 814 aaKnown RBP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PDIA5Q14554 519 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 MEI1Q5TIA1 1274 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 LRIG3Q6UXM1 1119 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CROCCP2Q86T23 111 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 DHX36Q9H2U1 1008 aaKnown RBP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 SUN1O94901 812 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 FAM107AO95990 144 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 GALCP54803 685 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 NUGGCQ68CJ6 796 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CPXCR1Q8N123 301 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 SYNCQ9H7C4 482 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF263O14978 683 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PRLRP16471 622 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 USP37Q86T82 979 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PNMA5Q96PV4 448 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 PARVGQ9HBI0 331 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 RGL1Q9NZL6 768 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 SERPINA10Q9UK55 444 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
SMAD9-202ENST00000379826 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-202ENST00000379826 ATP2A1O14983 1001 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 PPP2R5EQ16537 467 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 CENPPQ6IPU0 288 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 ZBTB33Q86T24 672 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 C4orf32Q8N8J7 132 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.44
SMAD9-202ENST00000379826 CXorf56Q9H5V9 222 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 ECT2Q9H8V3 914 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 AS3MTQ9HBK9 375 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 GDF3Q9NR23 364 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 AGTPBP1Q9UPW5 1226 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 SEMA3FQ13275 785 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 RAPGEF5Q92565 580 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 FNBP1Q96RU3 617 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 MXD3Q9BW11 206 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.44
SMAD9-202ENST00000379826 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 POLR2MP0CAP2 368 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 SOX5P35711 763 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 SF3B3Q15393 1217 aaKnown RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ZC2HC1CQ53FD0 456 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF571Q7Z3V5 609 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 KCNK18Q7Z418 384 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 DPF3Q92784 378 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 UBXN6Q9BZV1 441 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 AGPSO00116 658 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ITGA4P13612 1032 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 GAP43P17677 238 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 KCNA4P22459 653 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ALDH3A1P30838 453 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 FIGNQ5HY92 759 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 FYB2Q5VWT5 728 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 C16orf86Q6ZW13 317 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 GLG1Q92896 1179 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 NCAPGQ9BPX3 1015 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 RAD17O75943 681 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 GCLMP48507 274 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 ADCY2Q08462 1091 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.45
SMAD9-202ENST00000379826 TYW1Q9NV66 732 aaKnown RBP12.27□□□□□ -0.45
SMAD9-202ENST00000379826 GAS8O95995 478 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms