RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 MLNP12872 115 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 PRAMEP78395 509 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 BRD8Q9H0E9 1235 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 MAD2L2Q9UI95 211 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 TRIM13O60858 407 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 DEAF1O75398 565 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 SKAP2O75563 359 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 FEN1P39748 380 aaKnown RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 OR6P1Q8NGX9 317 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 URGCPQ8TCY9 931 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 NARS2Q96I59 477 aaKnown RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 ADAM21Q9UKJ8 722 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 KIAA1024Q9UPX6 916 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 SOS2Q07890 1332 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 HMOX2P30519 316 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 ALDH1B1P30837 517 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 ANKRD40Q6AI12 368 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 RMDN1Q96DB5 314 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 KIFC1Q9BW19 673 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 IGF1RP08069 1367 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 TTC21BQ7Z4L5 1316 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 HIBCHQ6NVY1 386 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 TBC1D1Q86TI0 1168 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 PNMA8BQ9ULN7 279 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 GFPT2O94808 682 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 KCNQ4P56696 695 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 CENPUQ71F23 418 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 APLFQ8IW19 511 aaPredicted RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 XAGE2Q96GT9 111 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 COQ7Q99807 217 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
HIPK3-202ENST00000379016 FKBP9O95302 570 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 FASTKD1Q53R41 847 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 FKBP9P1Q75LS8 142 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 STX12Q86Y82 276 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 SLC27A2O14975 620 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 SERPINB3P29508 390 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 PSMC6P62333 389 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 NBPF9Q3BBW0 867 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 GPKOWQ92917 476 aaPredicted RBP eCLIP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 MRPL47Q9HD33 250 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 KDM2BQ8NHM5 1336 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 CDC40O60508 579 aaKnown RBP eCLIP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 IL10P22301 178 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ICE2Q659A1 982 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ZNF614Q8N883 585 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 RIN3Q8TB24 985 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 THAP11Q96EK4 314 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 TSEN34Q9BSV6 310 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 FAM167BQ9BTA0 163 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 DFFAO00273 331 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 SMARCA1P28370 1054 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 YWHAZP63104 245 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ARL8AQ96BM9 186 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 NUGGCQ68CJ6 796 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ANKS6Q68DC2 871 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 SLFN12LQ6IEE8 588 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 ELAC2Q9BQ52 826 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 TCP1P17987 556 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 RCN1Q15293 331 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 BZW1Q7L1Q6 419 aaKnown RBP14.13□□□□□ -0.15
HIPK3-202ENST00000379016 HORMAD1Q86X24 394 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 USP28Q96RU2 1077 aa14.13□□□□□ -0.15
HIPK3-202ENST00000379016 GON4LQ3T8J9 2241 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 A0A087X0T9 212 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 CCND2P30279 289 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 TEDDM1Q5T9Z0 273 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 KRT84Q9NSB2 600 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 NOVA2Q9UNW9 492 aaKnown RBP14.12□□□□□ -0.15
HIPK3-202ENST00000379016 RNF103O00237 685 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 RWDD2BP57060 319 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 KIZQ2M2Z5 673 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 CEP170P1Q96L14 293 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 AP1M1Q9BXS5 423 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 KLHL25Q9H0H3 589 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 DCDC2Q9UHG0 476 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 KPNA7A9QM74 516 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 ALDH1A2O94788 518 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 AKT1P31749 480 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 FAM227BQ96M60 508 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 PITPNM3Q9BZ71 974 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 STON1Q9Y6Q2 735 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 FAM47E-STBD1D6RA91 191 aa14.12□□□□□ -0.15
HIPK3-202ENST00000379016 SNUPNO95149 360 aaKnown RBP14.12□□□□□ -0.15
HIPK3-202ENST00000379016 EIF2S1P05198 315 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms