RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 RARAP10276 462 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 STX17P56962 302 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 UBXN1Q04323 297 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MYO1EQ12965 1108 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 RASGRF1Q13972 1273 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 NXNQ6DKJ4 435 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 NFRKBQ6P4R8 1299 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 C16orf54Q6UWD8 224 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MAATS1Q7Z4T9 603 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 TBC1D10CQ8IV04 446 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 SMYD4Q8IYR2 804 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 KIAA1958Q8N8K9 716 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 KLHL23Q8NBE8 558 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 THAP3Q8WTV1 239 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ZBTB10Q96DT7 871 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MFSD3Q96ES6 412 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 VPS16Q9H269 839 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 AGPAT5Q9NUQ2 364 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 PANK4Q9NVE7 773 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ZNHIT6Q9NWK9 470 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ZFATQ9P243 1243 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 BTNL10A8MVZ5 291 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 UBE2Q2LH0YL09 131 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 RPSAP08865 295 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 IARSP41252 1262 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PAPOLAP51003 745 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 CUL1Q13616 776 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SEPT2Q15019 361 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 IFI16Q16666 785 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 THEMIS2Q5TEJ8 643 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 ALKBH2Q6NS38 261 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 TTI2Q6NXR4 508 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SLC30A9Q6PML9 568 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 CCDC81Q6ZN84 652 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 NIM1KQ8IY84 436 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 DIS3L2Q8IYB7 885 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 NOC3LQ8WTT2 800 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 NELFBQ8WX92 580 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PHKBQ93100 1093 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PYM1Q9BRP8 204 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 ARHGAP20Q9P2F6 1191 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 STRIP2Q9ULQ0 834 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PCDHA13Q9Y5I0 950 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SPATA31A3Q5VYP0 1347 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 TACC1O75410 805 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 BMP15O95972 392 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 IMPDH2P12268 514 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 GUCY1A2P33402 732 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 HTR3AP46098 478 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 KIF5AQ12840 1032 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PLS1Q14651 629 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 ALX1Q15699 326 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 HYIQ5T013 277 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 RBM12BQ8IXT5 1001 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 CHMP6Q96FZ7 201 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 BICD1Q96G01 975 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 EPSTI1Q96J88 318 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 SERINC2Q96SA4 455 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 ADAM33Q9BZ11 813 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 CPSF2Q9P2I0 782 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 WDR35Q9P2L0 1181 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 LRWD1Q9UFC0 647 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 AGAP1Q9UPQ3 857 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 ABCB11O95342 1321 aa7.26□□□□□ -1.25
CDKAL1-202ENST00000378610 PRAMEF22A3QJZ6 481 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 KLRC4O43908 158 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 RHOBTB3O94955 611 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 HEXIM1O94992 359 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 CCNB1P14635 433 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 NQO1P15559 274 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 MAGEA8P43361 318 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 MMP13P45452 471 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 ZNF131P52739 623 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 NCALDP61601 193 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 ATP2C1P98194 919 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 NPY5RQ15761 445 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 MTERF2Q49AM1 385 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 CFAP221Q4G0U5 840 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 MSL1Q68DK7 614 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 LVRNQ6Q4G3 990 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 SCFD2Q8WU76 684 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 AZIN2Q96A70 460 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 PPANQ9NQ55 473 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 VPS54Q9P1Q0 977 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 PNPLA7Q6ZV29 1317 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 ZSCAN5CA6NGD5 496 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 GCOM1H8Y6P7 765 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 STXBP3O00186 592 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 RNF8O76064 485 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 MYZAPP0CAP1 466 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 CASP1P29466 404 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 SKIV2L2P42285 1042 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 PRCPP42785 496 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 PMS1P54277 932 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 PURAQ00577 322 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 BNIP1Q12981 228 aa7.25□□□□□ -1.25
CDKAL1-202ENST00000378610 SAFBQ15424 915 aaKnown RBP eCLIP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms