RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 MED7O43513 233 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 MYO1EQ12965 1108 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 THNSL1Q8IYQ7 743 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 C2orf69Q8N8R5 385 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 OSBPL9Q96SU4 736 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 TRIM10Q9UDY6 481 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 KDM6AO15550 1401 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-201ENST00000378156 GGCXP38435 758 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 STK4Q13043 487 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CCDC197Q8NCU1 140 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 AGPAT5Q9NUQ2 364 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CNTNAP5Q8WYK1 1306 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 ESYT3A0FGR9 886 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 ENTPD3O75355 529 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-201ENST00000378156 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 SNX1Q13596 522 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 KNOP1Q1ED39 458 aaKnown RBP16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CDC42EP5Q6NZY7 148 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 GYPCP04921 128 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 FAM49AQ9H0Q0 323 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-201ENST00000378156 SEL1LQ9UBV2 794 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 TROAPQ12815 778 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 WHAMMQ8TF30 809 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 TRIM4Q9C037 500 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
NPHP4-201ENST00000378156 CLDN3O15551 220 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 NR1D1P20393 614 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 RSRC2Q7L4I2 434 aaKnown RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 DNAJC12Q9UKB3 198 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 OPHN1O60890 802 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 HSPA6P17066 643 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 MAPK6Q16659 721 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 KIAA1586Q9HCI6 787 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 PFDN4Q9NQP4 134 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 INTS9Q9NV88 658 aaKnown RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 NYAP2Q9P242 653 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 NDUFB10O96000 172 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 FGGP02679 453 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 RASA1P20936 1047 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 RNASELQ05823 741 aaKnown RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 PDIA5Q14554 519 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 CEP55Q53EZ4 464 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 SGO2Q562F6 1265 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 PACSIN2Q9UNF0 486 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 SLCO1A2P46721 670 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 SEPT10Q9P0V9 454 aa16.15■□□□□ 0.18
NPHP4-201ENST00000378156 NOVA2Q9UNW9 492 aaKnown RBP16.15■□□□□ 0.18
NPHP4-201ENST00000378156 SLC16A4O15374 487 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 C16orf86Q6ZW13 317 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 CATSPER4Q7RTX7 472 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 RFX6Q8HWS3 928 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 OTUD5Q96G74 571 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 GABBR1Q9UBS5 961 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 PDCLQ13371 301 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 METTL23Q86XA0 190 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ZNF185O15231 689 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 PSMC5P62195 406 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 SWSAP1Q6NVH7 229 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 PPP4R1Q8TF05 950 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 LXNQ9BS40 222 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ACTR5Q9H9F9 607 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ARHGAP42A6NI28 874 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 RHOBTB3O94955 611 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 PEX19P40855 299 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 GCLMP48507 274 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ADCY1Q08828 1119 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 PPP2R5CQ13362 524 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 REXO1L1PQ8IX06 675 aa16.14■□□□□ 0.17
NPHP4-201ENST00000378156 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
NPHP4-201ENST00000378156 EIF2AK1Q9BQI3 630 aaKnown RBP16.14■□□□□ 0.17
NPHP4-201ENST00000378156 ITIH6Q6UXX5 1313 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 PPP1R3GB7ZBB8 358 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 STMN1P16949 149 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 HMGCS2P54868 508 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 GSDMBQ8TAX9 411 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 CNOT7Q9UIV1 285 aaKnown RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 DENND3A2RUS2 1198 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 SGK1O00141 431 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 SRGNP10124 158 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 PDE1CQ14123 709 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 PSPC1Q8WXF1 523 aaKnown RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 FMO2Q99518 471 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 LRRC4Q9HBW1 653 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 MAD1L1Q9Y6D9 718 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms