RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	PEX3	P56589	373 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	LY6K	Q17RY6	165 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	GPAT2	Q6NUI2	795 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	FBXO16	Q8IX29	292 aa	Predicted RBP	12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	BRI3BP	Q8WY22	251 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	N4BP2L2	Q92802	583 aa	Predicted RBP	12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	BAG1	Q99933	345 aa	Predicted RBP	12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	AZI2	Q9H6S1	392 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	RPS6KL1	Q9Y6S9	549 aa		12.79	□□□□□ -0.36
LMO7-204	ENST00000377499	CALU	O43852	315 aa	Predicted RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	SNX1	Q13596	522 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	FBXW10	Q5XX13	1052 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	EPC1	Q9H2F5	836 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	MROH8	Q9H579	483 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	ACTN2	P35609	894 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	KNOP1	Q1ED39	458 aa	Known RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	C1orf186	Q6ZWK4	172 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	CPA4	Q9UI42	421 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	TELO2	Q9Y4R8	837 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	RGS20	O76081	388 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	RPL13	P26373	211 aa	Known RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	KRT9	P35527	623 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	RARRES1	P49788	294 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	DNM2	P50570	870 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	KCNA1	Q09470	495 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	SMC1A	Q14683	1233 aa	Known RBP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	IRF2BP1	Q8IU81	584 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	CRACR2A	Q9BSW2	395 aa		12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
LMO7-204	ENST00000377499	STAM2	O75886	525 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	KCNA2	P16389	499 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	COPB2	P35606	906 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	POLG	P54098	1239 aa	Predicted RBP	12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	SOX10	P56693	466 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	FKBP1B	P68106	108 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	GHRHR	Q02643	423 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	SPRYD7	Q5W111	196 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	CHADL	Q6NUI6	762 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	ERO1A	Q96HE7	468 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	ZNF302	Q9NR11	478 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	VPS18	Q9P253	973 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	ADAM21	Q9UKJ8	722 aa		12.77	□□□□□ -0.36
LMO7-204	ENST00000377499	KLHL33	A6NCF5	533 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	PHACTR2	O75167	634 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	SP2	Q02086	613 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	PRKCE	Q02156	737 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	ENOX2	Q16206	610 aa	Known RBP	12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	CACNA2D4	Q7Z3S7	1137 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	LRRN4CL	Q8ND94	238 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	BICD1	Q96G01	975 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	IKZF4	Q9H2S9	585 aa		12.77	□□□□□ -0.37
LMO7-204	ENST00000377499	USP27X	A6NNY8	438 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	SPATA31C2	B4DYI2	1134 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	SLC16A4	O15374	487 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	CNMD	O75829	334 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	TXN	P10599	105 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	RDX	P35241	583 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	SMTN	P53814	917 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	NEDD9	Q14511	834 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	TAF1C	Q15572	869 aa	Predicted RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	CCAR2	Q8N163	923 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	PARK7	Q99497	189 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	PCIF1	Q9H4Z3	704 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	RABEP2	Q9H5N1	569 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	LUC7L2	Q9Y383	392 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	LGALS16	A8MUM7	142 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	NDST4	Q9H3R1	872 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	SUGCT	Q9HAC7	445 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	UBA1	P22314	1058 aa	Known RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	ADORA2A	P29274	412 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	MATR3	P43243	847 aa	Known RBP eCLIP	12.76	□□□□□ -0.37	2e-6	■■■■□ 23.9
LMO7-204	ENST00000377499	CNGA4	Q8IV77	575 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	C4orf19	Q8IY42	314 aa		12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.76	□□□□□ -0.37
LMO7-204	ENST00000377499	EXOC3	O60645	756 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	EPB41	P11171	864 aa	Known RBP	12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	MUT	P22033	750 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	GCK	P35557	465 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	MAN2A1	Q16706	1144 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	VWA3B	Q502W6	1294 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	KCTD17	Q8N5Z5	321 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	UBXN4	Q92575	508 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	SPATA33	Q96N06	139 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	CEP89	Q96ST8	783 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	ODF2L	Q9ULJ1	636 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	KLK7	P49862	253 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	CCZ1B	P86790	482 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	CCZ1	P86791	482 aa	Predicted RBP	12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	DMP1	Q13316	513 aa	Predicted RBP	12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	SWT1	Q5T5J6	900 aa	Known RBP	12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	FAM133A	Q8N9E0	248 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	MIEF2	Q96C03	454 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	IFT74	Q96LB3	600 aa		12.75	□□□□□ -0.37
LMO7-204	ENST00000377499	KIFC3	Q9BVG8	833 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms