RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TBC1D1Q86TI0 1168 aaPredicted RBP16.78■□□□□ 0.28
FXN-201ENST00000377270 CCT6BQ92526 530 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 DDX27Q96GQ7 796 aaKnown RBP16.78■□□□□ 0.28
FXN-201ENST00000377270 SEC16BQ96JE7 1060 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 RPS6KC1Q96S38 1066 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 RHOBTB3O94955 611 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 NPR1P16066 1061 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 RFC5P40937 340 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
FXN-201ENST00000377270 ZNF572Q7Z3I7 529 aaPredicted RBP16.78■□□□□ 0.28
FXN-201ENST00000377270 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 LMNTD2Q8IXW0 634 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 ESYT2A0FGR8 921 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 TTLL1O95922 423 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 ALADP13716 330 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 TXKP42681 527 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 P3H1Q32P28 736 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 IRF2BP1Q8IU81 584 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
FXN-201ENST00000377270 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
FXN-201ENST00000377270 CUEDC2Q9H467 287 aa16.77■□□□□ 0.28
FXN-201ENST00000377270 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.77■□□□□ 0.28
FXN-201ENST00000377270 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 TRIM43BA6NCK2 446 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 TNFRSF8P28908 595 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 ADCY7P51828 1080 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 UBXN1Q04323 297 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 NSUN2Q08J23 767 aaKnown RBP eCLIP16.77■□□□□ 0.27
FXN-201ENST00000377270 BYSLQ13895 437 aaKnown RBP16.77■□□□□ 0.27
FXN-201ENST00000377270 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 P3H4Q92791 437 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 STIM2Q9P246 746 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 LTBP1Q14766 1721 aa16.77■□□□□ 0.27
FXN-201ENST00000377270 DYTNA2CJ06 578 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 PSMA7O14818 248 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 P4HA2O15460 535 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 TIMM44O43615 452 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 MLH1P40692 756 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 TSR1Q2NL82 804 aaKnown RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 CFAP58Q5T655 872 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 CACNA2D3Q8IZS8 1091 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 IQCKQ8N0W5 287 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 TRAPPC9Q96Q05 1148 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.76■□□□□ 0.27
FXN-201ENST00000377270 TTC26A0AVF1 554 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 ZNF233A6NK53 670 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 hCG_1984214I3L0E3 225 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 ZNF268Q14587 947 aaPredicted RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 ZNF713Q8N859 430 aaPredicted RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 LZICQ8WZA0 190 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 MAGEF1Q9HAY2 307 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 SNX12Q9UMY4 172 aa16.76■□□□□ 0.27
FXN-201ENST00000377270 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
FXN-201ENST00000377270 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 TMEM247A6NEH6 219 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 HNRNPRO43390 633 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 FLOT1O75955 427 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 LDHAP00338 332 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 HNRNPCP07910 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
FXN-201ENST00000377270 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 SHMT1P34896 483 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 PDE4DQ08499 809 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 FOXB2Q5VYV0 432 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 LACRTQ9GZZ8 138 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 INIPQ9NRY2 104 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 DLGAP2Q9P1A6 1054 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 CROTQ9UKG9 612 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 ATP9BO43861 1147 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 SLURP2P0DP57 97 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 CCNG1P51959 295 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 ASIC1P78348 528 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 ZNF543Q08ER8 600 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 CALCRLQ16602 461 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 THOC7Q6I9Y2 204 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 PPP4R3AQ6IN85 833 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 PACS1Q6VY07 963 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 CD302Q8IX05 232 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 PRCCQ92733 491 aaPredicted RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 CALML4Q96GE6 196 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 PURBQ96QR8 312 aaKnown RBP16.75■□□□□ 0.27
FXN-201ENST00000377270 RETREG1Q9H6L5 497 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 EFR3BQ9Y2G0 817 aa16.75■□□□□ 0.27
FXN-201ENST00000377270 SH3GLB1Q9Y371 365 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms