RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NCKAP1LP55160 1127 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 RAPGEF1Q13905 1077 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 UAP1Q16222 522 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-202ENST00000376659 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 EMBQ6PCB8 327 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 ATP8B4Q8TF62 1192 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 METTL14Q9HCE5 456 aaKnown RBP10.49□□□□□ -0.73
TRIM39-202ENST00000376659 PCDHA3Q9Y5H8 950 aa10.49□□□□□ -0.73
TRIM39-202ENST00000376659 ASTN2O75129 1339 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 SFI1A8K8P3 1242 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 TCP10L2B9ZVM9 353 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 MAPK13O15264 365 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 LRRN2O75325 713 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 XRCC5P13010 732 aaKnown RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 ACTN2P35609 894 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 EPHB4P54760 987 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 DLG4P78352 724 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 MRPS25P82663 173 aaKnown RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 KLHL30Q0D2K2 578 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 PPP2R5AQ15172 486 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 LDHDQ86WU2 507 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 SUPT20HQ8NEM7 779 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 LXNQ9BS40 222 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 MYH9P35579 1960 aaKnown RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 NFIBO00712 420 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 CARSP49589 748 aaKnown RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 SKOR1P84550 965 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 DGKZQ13574 1117 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 PCNX4Q63HM2 1172 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 CACNA2D4Q7Z3S7 1137 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 DRC1Q96MC2 740 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 GOLPH3Q9H4A6 298 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 PARVGQ9HBI0 331 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-202ENST00000376659 LCMT1Q9UIC8 334 aa10.48□□□□□ -0.73
TRIM39-202ENST00000376659 GCOM1H8Y6P7 765 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 CLIC2O15247 247 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 RAD51CO43502 376 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 C21orf2O43822 256 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 EVI5O60447 810 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 EIF3JO75822 258 aaKnown RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 POLR2MP0CAP2 368 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 SOX5P35711 763 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ZNF280AP59817 542 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 PSMB7Q99436 277 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 STK33Q9BYT3 514 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 SLC38A10Q9HBR0 1119 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ARHGEF10LQ9HCE6 1279 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 PDLIM7Q9NR12 457 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 TISP43B9A030 160 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 GCNT3O95395 438 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 EGFRP00533 1210 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 SSBP05455 408 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 HSPA9P38646 679 aaKnown RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 CD101Q93033 1021 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 WDR11Q9BZH6 1224 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 LRRC4CQ9HCJ2 640 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 TAS2R14Q9NYV8 317 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 NOCTQ9UK39 431 aaKnown RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 HIP1RO75146 1068 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 CHRNB2P17787 502 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 GTF2BQ00403 316 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ZNF568Q3ZCX4 644 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 MAP9Q49MG5 647 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 GBP6Q6ZN66 633 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 AGBL3Q8NEM8 1001 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 NEK9Q8TD19 979 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ARHGEF26Q96DR7 871 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 CALR3Q96L12 384 aaKnown RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
TRIM39-202ENST00000376659 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-202ENST00000376659 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 SLC39A4Q6P5W5 647 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 CCDC174Q6PII3 467 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 FAM186BQ8IYM0 893 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 METTL13Q8N6R0 699 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 WNK4Q96J92 1243 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 SENP7Q9BQF6 1050 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 INTS2Q9H0H0 1204 aaKnown RBP10.46□□□□□ -0.73
TRIM39-202ENST00000376659 DEF6Q9H4E7 631 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 KCNH7Q9NS40 1196 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 PLXNA1Q9UIW2 1896 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
TRIM39-202ENST00000376659 WNT10BO00744 389 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 MTA2O94776 668 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 CCNE2O96020 404 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 ADSSP30520 456 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.73
TRIM39-202ENST00000376659 RARRES1P49788 294 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms