RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 P2RX5Q93086 422 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 AP5M1Q9H0R1 490 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 MRPL44Q9H9J2 332 aaKnown RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 ZNF215Q9UL58 517 aaPredicted RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 NFE2L3Q9Y4A8 694 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 KAT6AQ92794 2004 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 EVPLQ92817 2033 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 ZMYM2Q9UBW7 1377 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 UBE4BO95155 1302 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 SEPT4O43236 478 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 HBP1O60381 514 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 F2P00734 622 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 PLS3P13797 630 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 CCNE1P24864 410 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 CCND3P30281 292 aaPredicted RBP11.55□□□□□ -0.56
PDPN-203ENST00000376061 NMT1P30419 496 aaKnown RBP11.55□□□□□ -0.56
PDPN-203ENST00000376061 CPT1AP50416 773 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 PRMT2P55345 433 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 SOX10P56693 466 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
PDPN-203ENST00000376061 BMT2Q1RMZ1 405 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 SPATA1Q5VX52 437 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 CENPPQ6IPU0 288 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 TTI2Q6NXR4 508 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 FAM178BQ8IXR5 827 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 TRAPPC12Q8WVT3 735 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 BSNDQ8WZ55 320 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 KIFAP3Q92845 792 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
PDPN-203ENST00000376061 UPF3AQ9H1J1 476 aaKnown RBP11.55□□□□□ -0.56
PDPN-203ENST00000376061 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 RNPEPQ9H4A4 650 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 WBP1LQ9NX94 342 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 SCN10AQ9Y5Y9 1956 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 COL1A2P08123 1366 aa11.55□□□□□ -0.56
PDPN-203ENST00000376061 BICDL2A1A5D9 508 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 MYADML2A6NDP7 307 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 H3BRB1 525 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 K7ENM7 598 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 EIF3DO15371 548 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDPN-203ENST00000376061 AP5Z1O43299 807 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 MAFO75444 373 aaPredicted RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 PPP1R37O75864 691 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 GCNT3O95395 438 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZNF18P17022 549 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 CNGA1P29973 690 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 HOXD13P35453 343 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 GJA9P57773 515 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 RTP1P59025 263 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 TPM4P67936 248 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 BEX3Q00994 111 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 TBC1D8BQ0IIM8 1120 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZCWPW2Q504Y3 356 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 NELFCDQ8IXH7 590 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 DUSP9Q99956 384 aaKnown RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 TUT1Q9H6E5 874 aaKnown RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 LARSQ9P2J5 1176 aaKnown RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 IGKV6-21A0A0C4DH24 114 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 PRPF6O94906 941 aaKnown RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 C22orf31O95567 290 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 INHAP05111 366 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 MAPTP10636 758 aaKnown RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 RARBP10826 455 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ARL2P36404 184 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 NCKAP1LP55160 1127 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 PEX3P56589 373 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 LRRC63Q05C16 580 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 DMP1Q13316 513 aaPredicted RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZC2HC1CQ53FD0 456 aaPredicted RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 BRDTQ58F21 947 aaPredicted RBP11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZNF484Q5JVG2 852 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 CDKAL1Q5VV42 579 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ANKRD40Q6AI12 368 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 FOXR2Q6PJQ5 311 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 SARM1Q6SZW1 724 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ZNF507Q8TCN5 953 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 KAT2BQ92831 832 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 STRA6Q9BX79 667 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
PDPN-203ENST00000376061 ADGRA3Q8IWK6 1321 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 SLC16A4O15374 487 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 KIF20AO95235 890 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms