RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 LOXHD1Q8IVV2 1947 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 GTPBP10A4D1E9 387 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PPM1KQ8N3J5 372 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ZNF483Q8TF39 744 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TTC26A0AVF1 554 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SGK1O00141 431 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PAMP19021 973 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TAC1P20366 129 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PTGISQ16647 500 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 NT5DC1Q5TFE4 455 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TNIP2Q8NFZ5 429 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 MYCBPAPQ8TBZ2 947 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ELAC2Q9BQ52 826 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PDXKO00764 312 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 RAD23BP54727 409 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PFKFB3Q16875 520 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 JADE1Q6IE81 842 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ADAMTS1Q9UHI8 967 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 CDY2AQ9Y6F7 541 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 APOA4P06727 396 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 EXOSC10Q01780 885 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TMED2Q15363 201 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 CYTH2Q99418 400 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TLK1Q9UKI8 766 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 FMN2Q9NZ56 1722 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 K7ENM7 598 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SNUPNO95149 360 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 HSPA1AP0DMV8 641 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 HSPA1BP0DMV9 641 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 DEFA1P59665 94 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 DEFA3P59666 94 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ZNF496Q96IT1 587 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 AZI2Q9H6S1 392 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SUN2Q9UH99 717 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SORCS3Q9UPU3 1222 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 H0Y626 953 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TRIM16O95361 564 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 BRAFP15056 766 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TECP42680 631 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 OTUD7BQ6GQQ9 843 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PARVBQ9HBI1 364 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ZNF839A8K0R7 811 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 LAMB3Q13751 1172 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 ZNF589Q86UQ0 364 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TMEM51Q9NW97 253 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 INPP1P49441 399 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 CLIC6Q96NY7 704 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 TRAPPC9Q96Q05 1148 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 NAT9Q9BTE0 207 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 RANBP17Q9H2T7 1088 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 ECT2Q9H8V3 914 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 BIRC2Q13490 618 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 MCPH1Q8NEM0 835 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 ENGASEQ8NFI3 743 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 PAPOLBQ9NRJ5 636 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 LEMD3Q9Y2U8 911 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 PCDHA1Q9Y5I3 950 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 KANSL1LA0AUZ9 987 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 DDX5P17844 614 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 SLC44A4Q53GD3 710 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 ARFIP2P53365 341 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 UGP2Q16851 508 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 TC2NQ8N9U0 490 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 PRPF38AQ8NAV1 312 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 PPP1R14BQ96C90 147 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 C7orf25Q9BPX7 421 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 ING2Q9H160 280 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 GGA1Q9UJY5 639 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 FRMD3A2A2Y4 597 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 C4BPBP20851 252 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 HNRNPH1P31943 449 aaKnown RBP9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 TMPRSS15P98073 1019 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 DSG1Q02413 1049 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 C16orf89Q6UX73 402 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
SHROOM4-202ENST00000376020 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms