RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 A0A087WZ62 844 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 POTEMA6NI47 508 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 C9IYK1 514 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 CSDE1O75534 798 aaKnown RBP17.13■□□□□ 0.33
APOA1-204ENST00000375323 LYPLA2O95372 231 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 FGFR4P22455 802 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 CDC42EP1Q00587 391 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
APOA1-204ENST00000375323 XKR9Q5GH70 373 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 SLC24A5Q71RS6 500 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 SLC7A3Q8WY07 619 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
APOA1-204ENST00000375323 DHX33Q9H6R0 707 aaKnown RBP17.13■□□□□ 0.33
APOA1-204ENST00000375323 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 LMCD1Q9NZU5 365 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 PPME1Q9Y570 386 aa17.13■□□□□ 0.33
APOA1-204ENST00000375323 LOXHD1Q8IVV2 1947 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 OR52Z1P0C646 297 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 GJB2P29033 226 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 RFC5P40937 340 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 POLGP54098 1239 aaPredicted RBP17.12■□□□□ 0.33
APOA1-204ENST00000375323 FAM189BP81408 668 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
APOA1-204ENST00000375323 NBR1Q14596 966 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 NEK9Q8TD19 979 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 GCOM2Q9BZD3 368 aaPredicted RBP17.12■□□□□ 0.33
APOA1-204ENST00000375323 BMP2KQ9NSY1 1161 aaPredicted RBP17.12■□□□□ 0.33
APOA1-204ENST00000375323 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
APOA1-204ENST00000375323 PCDHB7Q9Y5E2 793 aa17.12■□□□□ 0.33
APOA1-204ENST00000375323 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 H3BNC9 293 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 BMPR1AP36894 532 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 TECP42680 631 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 GATMP50440 423 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 TOB1P50616 345 aaPredicted RBP17.11■□□□□ 0.33
APOA1-204ENST00000375323 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
APOA1-204ENST00000375323 ZNF410Q86VK4 478 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
APOA1-204ENST00000375323 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
APOA1-204ENST00000375323 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 ANKEF1Q9NU02 776 aa17.11■□□□□ 0.33
APOA1-204ENST00000375323 PRRC2BQ5JSZ5 2229 aaKnown RBP17.11■□□□□ 0.33
APOA1-204ENST00000375323 A0A087WWV3 80 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
APOA1-204ENST00000375323 CTNNB1P35222 781 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 GPM6BQ13491 265 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 EMC2Q15006 297 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
APOA1-204ENST00000375323 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
APOA1-204ENST00000375323 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
APOA1-204ENST00000375323 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
APOA1-204ENST00000375323 PRUNE2Q8WUY3 3088 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 C5orf67F2Z3F1 127 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 RB1P06400 928 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 PSPC1Q8WXF1 523 aaKnown RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 XPNPEP1Q9NQW7 623 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
APOA1-204ENST00000375323 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
APOA1-204ENST00000375323 TRANK1O15050 2925 aa17.08■□□□□ 0.33
APOA1-204ENST00000375323 ASAP2O43150 1006 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 MED24O75448 989 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 FGFR1P11362 822 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
APOA1-204ENST00000375323 RARRES1P49788 294 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 PTGDRQ13258 359 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 TCP11Q8WWU5 503 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 MRPL38Q96DV4 380 aaKnown RBP17.08■□□□□ 0.32
APOA1-204ENST00000375323 MTRQ99707 1265 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
APOA1-204ENST00000375323 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.32
APOA1-204ENST00000375323 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
APOA1-204ENST00000375323 H3BQV1 296 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms